RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 SLC24A5Q71RS6 500 aa27.78■■■□□ 2.04
PMS1-214ENST00000446877 RPGRIP1Q96KN7 1286 aa27.78■■■□□ 2.04
PMS1-214ENST00000446877 ADAM2Q99965 735 aa27.78■■■□□ 2.04
PMS1-214ENST00000446877 LRRC2Q9BYS8 371 aa27.78■■■□□ 2.04
PMS1-214ENST00000446877 ERVK-5Q9HDB9 667 aa27.78■■■□□ 2.04
PMS1-214ENST00000446877 NOC2LQ9Y3T9 749 aaKnown RBP27.78■■■□□ 2.04
PMS1-214ENST00000446877 SLC27A2O14975 620 aa27.77■■■□□ 2.04
PMS1-214ENST00000446877 GPR182O15218 404 aa27.77■■■□□ 2.04
PMS1-214ENST00000446877 ATG7O95352 703 aa27.77■■■□□ 2.04
PMS1-214ENST00000446877 PTPN5P54829 565 aa27.77■■■□□ 2.04
PMS1-214ENST00000446877 ITGB3BPQ13352 177 aaPredicted RBP27.77■■■□□ 2.04
PMS1-214ENST00000446877 CBX2Q14781 532 aaPredicted RBP27.77■■■□□ 2.04
PMS1-214ENST00000446877 WWC2Q6AWC2 1192 aa27.77■■■□□ 2.04
PMS1-214ENST00000446877 PDE12Q6L8Q7 609 aaKnown RBP27.77■■■□□ 2.04
PMS1-214ENST00000446877 THNSL1Q8IYQ7 743 aa27.77■■■□□ 2.04
PMS1-214ENST00000446877 ATP8B4Q8TF62 1192 aa27.77■■■□□ 2.04
PMS1-214ENST00000446877 PGBD1Q96JS3 809 aa27.77■■■□□ 2.04
PMS1-214ENST00000446877 CDCA3Q99618 268 aaPredicted RBP27.77■■■□□ 2.04
PMS1-214ENST00000446877 RGS18Q9NS28 235 aa27.77■■■□□ 2.04
PMS1-214ENST00000446877 ST3GAL5Q9UNP4 418 aa27.77■■■□□ 2.04
PMS1-214ENST00000446877 MEIS1O00470 390 aa27.76■■■□□ 2.03
PMS1-214ENST00000446877 FGF18O76093 207 aa27.76■■■□□ 2.03
PMS1-214ENST00000446877 ADCY7P51828 1080 aa27.76■■■□□ 2.03
PMS1-214ENST00000446877 PPP1R18Q6NYC8 613 aa27.76■■■□□ 2.03
PMS1-214ENST00000446877 KIAA0319LQ8IZA0 1049 aa27.76■■■□□ 2.03
PMS1-214ENST00000446877 NEK1Q96PY6 1258 aa27.76■■■□□ 2.03
PMS1-214ENST00000446877 ANO3Q9BYT9 981 aa27.76■■■□□ 2.03
PMS1-214ENST00000446877 DDX39AO00148 427 aaKnown RBP27.75■■■□□ 2.03
PMS1-214ENST00000446877 MGEA5O60502 916 aa27.75■■■□□ 2.03
PMS1-214ENST00000446877 SRGAP2BP0DMP2 458 aa27.75■■■□□ 2.03
PMS1-214ENST00000446877 ZNF484Q5JVG2 852 aa27.75■■■□□ 2.03
PMS1-214ENST00000446877 FAM102BQ5T8I3 360 aa27.75■■■□□ 2.03
PMS1-214ENST00000446877 CREB3L3Q68CJ9 461 aa27.75■■■□□ 2.03
PMS1-214ENST00000446877 LSG1Q9H089 658 aaKnown RBP27.75■■■□□ 2.03
PMS1-214ENST00000446877 CDHR5Q9HBB8 845 aa27.75■■■□□ 2.03
PMS1-214ENST00000446877 ATP6V0A4Q9HBG4 840 aa27.75■■■□□ 2.03
PMS1-214ENST00000446877 RBM28Q9NW13 759 aaKnown RBP27.75■■■□□ 2.03
PMS1-214ENST00000446877 TMEM260Q9NX78 707 aa27.75■■■□□ 2.03
PMS1-214ENST00000446877 ZNF318Q5VUA4 2279 aa27.75■■■□□ 2.03
PMS1-214ENST00000446877 IGKV6D-21A0A0A0MT36 114 aa27.74■■■□□ 2.03
PMS1-214ENST00000446877 DUSP6Q16828 381 aa27.74■■■□□ 2.03
PMS1-214ENST00000446877 PDXDC2PQ6P474 469 aa27.74■■■□□ 2.03
PMS1-214ENST00000446877 ABHD15Q6UXT9 468 aa27.74■■■□□ 2.03
PMS1-214ENST00000446877 SGMS1Q86VZ5 419 aa27.74■■■□□ 2.03
PMS1-214ENST00000446877 GLT8D2Q9H1C3 349 aa27.74■■■□□ 2.03
PMS1-214ENST00000446877 ZNF302Q9NR11 478 aa27.74■■■□□ 2.03
PMS1-214ENST00000446877 TYW1Q9NV66 732 aaKnown RBP27.74■■■□□ 2.03
PMS1-214ENST00000446877 PUF60Q9UHX1 559 aaKnown RBP27.74■■■□□ 2.03
PMS1-214ENST00000446877 TECTAO75443 2155 aa27.74■■■□□ 2.03
PMS1-214ENST00000446877 COL1A2P08123 1366 aa27.73■■■□□ 2.03
PMS1-214ENST00000446877 SMCO2A6NFE2 343 aa27.73■■■□□ 2.03
PMS1-214ENST00000446877 CCNE2O96020 404 aa27.73■■■□□ 2.03
PMS1-214ENST00000446877 ATF7P17544 494 aaPredicted RBP27.73■■■□□ 2.03
PMS1-214ENST00000446877 ERVFC1P60507 584 aa27.73■■■□□ 2.03
PMS1-214ENST00000446877 COL9A3Q14050 684 aaPredicted RBP27.73■■■□□ 2.03
PMS1-214ENST00000446877 IER5LQ5T953 404 aa27.73■■■□□ 2.03
PMS1-214ENST00000446877 MIS18BP1Q6P0N0 1132 aa27.73■■■□□ 2.03
PMS1-214ENST00000446877 CKAP2LQ8IYA6 745 aa27.73■■■□□ 2.03
PMS1-214ENST00000446877 FBXL6Q8N531 539 aa27.73■■■□□ 2.03
PMS1-214ENST00000446877 PRSS33Q8NF86 280 aa27.73■■■□□ 2.03
PMS1-214ENST00000446877 V9GY48 417 aaPredicted RBP27.73■■■□□ 2.03
PMS1-214ENST00000446877 ATG2AQ2TAZ0 1938 aa27.73■■■□□ 2.03
PMS1-214ENST00000446877 C9IYK1 514 aa27.72■■■□□ 2.03
PMS1-214ENST00000446877 SREBF1P36956 1147 aa27.72■■■□□ 2.03
PMS1-214ENST00000446877 CRYBB1P53674 252 aaPredicted RBP27.72■■■□□ 2.03
PMS1-214ENST00000446877 AP3B2Q13367 1082 aa27.72■■■□□ 2.03
PMS1-214ENST00000446877 TYW1BQ6NUM6 668 aa27.72■■■□□ 2.03
PMS1-214ENST00000446877 SWSAP1Q6NVH7 229 aa27.72■■■□□ 2.03
PMS1-214ENST00000446877 NIPA1Q7RTP0 329 aa27.72■■■□□ 2.03
PMS1-214ENST00000446877 COLGALT1Q8NBJ5 622 aa27.72■■■□□ 2.03
PMS1-214ENST00000446877 TMEM40Q8WWA1 233 aa27.72■■■□□ 2.03
PMS1-214ENST00000446877 TMEM161AQ9NX61 479 aa27.72■■■□□ 2.03
PMS1-214ENST00000446877 LAG3P18627 525 aa27.71■■■□□ 2.03
PMS1-214ENST00000446877 RBM10P98175 930 aaKnown RBP27.71■■■□□ 2.03
PMS1-214ENST00000446877 SIGLEC14Q08ET2 396 aa27.71■■■□□ 2.03
PMS1-214ENST00000446877 KIZQ2M2Z5 673 aa27.71■■■□□ 2.03
PMS1-214ENST00000446877 PLA2G4DQ86XP0 818 aa27.71■■■□□ 2.03
PMS1-214ENST00000446877 CCDC60Q8IWA6 550 aaPredicted RBP27.71■■■□□ 2.03
PMS1-214ENST00000446877 SUSD6Q92537 303 aa27.71■■■□□ 2.03
PMS1-214ENST00000446877 CNTNAP5Q8WYK1 1306 aa27.7■■■□□ 2.03
PMS1-214ENST00000446877 hCG_1984214I3L0E3 225 aa27.7■■■□□ 2.02
PMS1-214ENST00000446877 NECTIN1Q15223 517 aa27.7■■■□□ 2.02
PMS1-214ENST00000446877 RTN1Q16799 776 aa27.7■■■□□ 2.02
PMS1-214ENST00000446877 APOA5Q6Q788 366 aa27.7■■■□□ 2.02
PMS1-214ENST00000446877 METTL13Q8N6R0 699 aa27.7■■■□□ 2.02
PMS1-214ENST00000446877 ZNF713Q8N859 430 aaPredicted RBP27.7■■■□□ 2.02
PMS1-214ENST00000446877 VN1R2Q8NFZ6 395 aa27.7■■■□□ 2.02
PMS1-214ENST00000446877 PPP1R16BQ96T49 567 aa27.7■■■□□ 2.02
PMS1-214ENST00000446877 OSMRQ99650 979 aa27.7■■■□□ 2.02
PMS1-214ENST00000446877 ELAC1Q9H777 363 aaKnown RBP27.7■■■□□ 2.02
PMS1-214ENST00000446877 LZTS1Q9Y250 596 aa27.7■■■□□ 2.02
PMS1-214ENST00000446877 FGFR1P11362 822 aa27.69■■■□□ 2.02
PMS1-214ENST00000446877 FAM189BP81408 668 aa27.69■■■□□ 2.02
PMS1-214ENST00000446877 RNF20Q5VTR2 975 aa27.69■■■□□ 2.02
PMS1-214ENST00000446877 MRPS27Q92552 414 aaKnown RBP27.69■■■□□ 2.02
PMS1-214ENST00000446877 PHOX2BQ99453 314 aa27.69■■■□□ 2.02
PMS1-214ENST00000446877 ESYT1Q9BSJ8 1104 aa27.69■■■□□ 2.02
PMS1-214ENST00000446877 ANO2Q9NQ90 1003 aa27.69■■■□□ 2.02
PMS1-214ENST00000446877 BARHL2Q9NY43 387 aa27.69■■■□□ 2.02
PMS1-214ENST00000446877 FSCN2O14926 492 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms