RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 CCNT1O60563 726 aaKnown RBP24.95■■□□□ 1.58
HDLBP-220ENST00000442730 KRT40Q6A162 431 aa24.95■■□□□ 1.58
HDLBP-220ENST00000442730 TRMT1LQ7Z2T5 733 aaKnown RBP24.95■■□□□ 1.58
HDLBP-220ENST00000442730 SPRED2Q7Z698 418 aa24.95■■□□□ 1.58
HDLBP-220ENST00000442730 KIAA0319LQ8IZA0 1049 aa24.95■■□□□ 1.58
HDLBP-220ENST00000442730 NME8Q8N427 588 aa24.95■■□□□ 1.58
HDLBP-220ENST00000442730 SLC17A8Q8NDX2 589 aa24.95■■□□□ 1.58
HDLBP-220ENST00000442730 NAP1L4Q99733 375 aaKnown RBP24.95■■□□□ 1.58
HDLBP-220ENST00000442730 LLPHQ9BRT6 129 aaKnown RBP24.95■■□□□ 1.58
HDLBP-220ENST00000442730 AGO3Q9H9G7 860 aaKnown RBP24.95■■□□□ 1.58
HDLBP-220ENST00000442730 VAV3Q9UKW4 847 aa24.95■■□□□ 1.58
HDLBP-220ENST00000442730 SQORQ9Y6N5 450 aa24.95■■□□□ 1.58
HDLBP-220ENST00000442730 MYH9P35579 1960 aaKnown RBP24.94■■□□□ 1.58
HDLBP-220ENST00000442730 EPOPA6NHQ4 379 aa24.94■■□□□ 1.58
HDLBP-220ENST00000442730 HTRA4P83105 476 aaPredicted RBP24.94■■□□□ 1.58
HDLBP-220ENST00000442730 TRIM29Q14134 588 aa24.94■■□□□ 1.58
HDLBP-220ENST00000442730 DIS3L2Q8IYB7 885 aaKnown RBP24.94■■□□□ 1.58
HDLBP-220ENST00000442730 FAM20AQ96MK3 541 aa24.94■■□□□ 1.58
HDLBP-220ENST00000442730 CELF4Q9BZC1 486 aaKnown RBP24.94■■□□□ 1.58
HDLBP-220ENST00000442730 CERS4Q9HA82 394 aa24.94■■□□□ 1.58
HDLBP-220ENST00000442730 CEP131Q9UPN4 1083 aa24.94■■□□□ 1.58
HDLBP-220ENST00000442730 WDR81Q562E7 1941 aa24.94■■□□□ 1.58
HDLBP-220ENST00000442730 BTBD18B2RXH4 712 aa24.93■■□□□ 1.58
HDLBP-220ENST00000442730 CD52P31358 61 aa24.93■■□□□ 1.58
HDLBP-220ENST00000442730 POTEDQ86YR6 584 aa24.93■■□□□ 1.58
HDLBP-220ENST00000442730 USP38Q8NB14 1042 aa24.93■■□□□ 1.58
HDLBP-220ENST00000442730 HAS1Q92839 578 aa24.93■■□□□ 1.58
HDLBP-220ENST00000442730 TOP1MTQ969P6 601 aa24.93■■□□□ 1.58
HDLBP-220ENST00000442730 ZSCAN31Q96LW9 406 aaPredicted RBP24.93■■□□□ 1.58
HDLBP-220ENST00000442730 SH2B1Q9NRF2 756 aaPredicted RBP24.93■■□□□ 1.58
HDLBP-220ENST00000442730 COL4A6Q14031 1691 aa24.93■■□□□ 1.58
HDLBP-220ENST00000442730 LINC01553A4QN01 128 aa24.92■■□□□ 1.58
HDLBP-220ENST00000442730 TBX3O15119 743 aa24.92■■□□□ 1.58
HDLBP-220ENST00000442730 PPP2R5CQ13362 524 aa24.92■■□□□ 1.58
HDLBP-220ENST00000442730 RABEP1Q15276 862 aa24.92■■□□□ 1.58
HDLBP-220ENST00000442730 ARNTL2Q8WYA1 636 aa24.92■■□□□ 1.58
HDLBP-220ENST00000442730 INSL6Q9Y581 213 aa24.92■■□□□ 1.58
HDLBP-220ENST00000442730 A0A0C4DFX4 3053 aa24.92■■□□□ 1.58
HDLBP-220ENST00000442730 METTL13Q8N6R0 699 aa24.91■■□□□ 1.58
HDLBP-220ENST00000442730 LINC01465Q8N7H1 131 aa24.91■■□□□ 1.58
HDLBP-220ENST00000442730 SP7Q8TDD2 431 aaPredicted RBP24.91■■□□□ 1.58
HDLBP-220ENST00000442730 LINC01599Q8WXQ3 324 aa24.91■■□□□ 1.58
HDLBP-220ENST00000442730 NRBP2Q9NSY0 501 aa24.91■■□□□ 1.58
HDLBP-220ENST00000442730 COL4A4P53420 1690 aaPredicted RBP24.91■■□□□ 1.58
HDLBP-220ENST00000442730 MYO9BQ13459 2157 aa24.9■■□□□ 1.58
HDLBP-220ENST00000442730 RFXAPO00287 272 aa24.9■■□□□ 1.58
HDLBP-220ENST00000442730 EML1O00423 815 aa24.9■■□□□ 1.58
HDLBP-220ENST00000442730 MAGEB2O15479 319 aa24.9■■□□□ 1.58
HDLBP-220ENST00000442730 IGFBP4P22692 258 aa24.9■■□□□ 1.58
HDLBP-220ENST00000442730 PAK2Q13177 524 aa24.9■■□□□ 1.58
HDLBP-220ENST00000442730 PADI3Q9ULW8 664 aa24.9■■□□□ 1.58
HDLBP-220ENST00000442730 UPP2O95045 317 aa24.89■■□□□ 1.58
HDLBP-220ENST00000442730 STBD1O95210 358 aa24.89■■□□□ 1.58
HDLBP-220ENST00000442730 CLCN3P51790 818 aa24.89■■□□□ 1.58
HDLBP-220ENST00000442730 TARBP2Q15633 366 aaKnown RBP24.89■■□□□ 1.58
HDLBP-220ENST00000442730 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.89■■□□□ 1.58
HDLBP-220ENST00000442730 BANK1Q8NDB2 785 aa24.89■■□□□ 1.58
HDLBP-220ENST00000442730 TMEM40Q8WWA1 233 aa24.89■■□□□ 1.58
HDLBP-220ENST00000442730 YME1L1Q96TA2 773 aa24.89■■□□□ 1.58
HDLBP-220ENST00000442730 CDHR5Q9HBB8 845 aa24.89■■□□□ 1.58
HDLBP-220ENST00000442730 SEPT9Q9UHD8 586 aaPredicted RBP24.89■■□□□ 1.58
HDLBP-220ENST00000442730 GINS2Q9Y248 185 aa24.89■■□□□ 1.58
HDLBP-220ENST00000442730 TMEM150BA6NC51 233 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 WNT7AO00755 349 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 ENPP3O14638 875 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 VTNP04004 478 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 HMGN5P82970 282 aaKnown RBP24.88■■□□□ 1.57
HDLBP-220ENST00000442730 GUCY1B3Q02153 619 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 SPIRE1Q08AE8 756 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 KIZQ2M2Z5 673 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 XKR3Q5GH77 459 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 LRRC71Q8N4P6 559 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 C8orf76Q96K31 380 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 TGS1Q96RS0 853 aaKnown RBP24.88■■□□□ 1.57
HDLBP-220ENST00000442730 PPP1R16BQ96T49 567 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 FTHL17Q9BXU8 183 aa24.88■■□□□ 1.57
HDLBP-220ENST00000442730 NIFKQ9BYG3 293 aaKnown RBP24.88■■□□□ 1.57
HDLBP-220ENST00000442730 UPF2Q9HAU5 1272 aaKnown RBP24.88■■□□□ 1.57
HDLBP-220ENST00000442730 GPR32O75388 356 aa24.87■■□□□ 1.57
HDLBP-220ENST00000442730 ERVK-21P61565 698 aa24.87■■□□□ 1.57
HDLBP-220ENST00000442730 PSMC5P62195 406 aa24.87■■□□□ 1.57
HDLBP-220ENST00000442730 TMEM266Q2M3C6 531 aa24.87■■□□□ 1.57
HDLBP-220ENST00000442730 EFCAB12Q6NXP0 572 aa24.87■■□□□ 1.57
HDLBP-220ENST00000442730 SLFN12Q8IYM2 578 aa24.87■■□□□ 1.57
HDLBP-220ENST00000442730 CEP89Q96ST8 783 aa24.87■■□□□ 1.57
HDLBP-220ENST00000442730 MAP7D2Q96T17 732 aa24.87■■□□□ 1.57
HDLBP-220ENST00000442730 TMX1Q9H3N1 280 aa24.87■■□□□ 1.57
HDLBP-220ENST00000442730 ERVK-5Q9HDB9 667 aa24.87■■□□□ 1.57
HDLBP-220ENST00000442730 MTUS1Q9ULD2 1270 aa24.87■■□□□ 1.57
HDLBP-220ENST00000442730 NOC2LQ9Y3T9 749 aaKnown RBP24.87■■□□□ 1.57
HDLBP-220ENST00000442730 LPXNO60711 386 aa24.86■■□□□ 1.57
HDLBP-220ENST00000442730 POU3F3P20264 500 aaPredicted RBP24.86■■□□□ 1.57
HDLBP-220ENST00000442730 CRYBB1P53674 252 aaPredicted RBP24.86■■□□□ 1.57
HDLBP-220ENST00000442730 TBC1D8BQ0IIM8 1120 aa24.86■■□□□ 1.57
HDLBP-220ENST00000442730 SAFBQ15424 915 aaKnown RBP eCLIP24.86■■□□□ 1.57
HDLBP-220ENST00000442730 RTN4RL1Q86UN2 441 aaPredicted RBP24.86■■□□□ 1.57
HDLBP-220ENST00000442730 OSMRQ99650 979 aa24.86■■□□□ 1.57
HDLBP-220ENST00000442730 TSPYL2Q9H2G4 693 aaPredicted RBP24.86■■□□□ 1.57
HDLBP-220ENST00000442730 RC3H2Q9HBD1 1191 aaKnown RBP24.86■■□□□ 1.57
HDLBP-220ENST00000442730 AKT3Q9Y243 479 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms