RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 HCSTQ9UBK5 93 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 NOC2LQ9Y3T9 749 aaKnown RBP20.65■□□□□ 0.9
GTF3A-204ENST00000438571 RWDD3Q9Y3V2 267 aa20.65■□□□□ 0.9
GTF3A-204ENST00000438571 ESYT2A0FGR8 921 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 PI4K2BG5E9Z4 385 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 IPO5O00410 1097 aaKnown RBP20.64■□□□□ 0.89
GTF3A-204ENST00000438571 TBX10O75333 385 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 MMP1P03956 469 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 RPLP2P05387 115 aaKnown RBP20.64■□□□□ 0.89
GTF3A-204ENST00000438571 ITGB1P05556 798 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 HMGB1P09429 215 aaKnown RBP20.64■□□□□ 0.89
GTF3A-204ENST00000438571 SSTR3P32745 418 aaPredicted RBP20.64■□□□□ 0.89
GTF3A-204ENST00000438571 IRS1P35568 1242 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 CTC1Q2NKJ3 1217 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 TMEM31Q5JXX7 168 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 ADGRD2Q7Z7M1 963 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 TEX2Q8IWB9 1127 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 CMTR2Q8IYT2 770 aaKnown RBP20.64■□□□□ 0.89
GTF3A-204ENST00000438571 KIAA0319LQ8IZA0 1049 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 ZNF577Q9BSK1 485 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 LMAN2LQ9H0V9 348 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 GLT8D2Q9H1C3 349 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 PLAGL2Q9UPG8 496 aa20.64■□□□□ 0.89
GTF3A-204ENST00000438571 COL1A2P08123 1366 aa20.63■□□□□ 0.89
GTF3A-204ENST00000438571 C22orf31O95567 290 aa20.63■□□□□ 0.89
GTF3A-204ENST00000438571 SLC26A2P50443 739 aa20.63■□□□□ 0.89
GTF3A-204ENST00000438571 NTRK3Q16288 839 aa20.63■□□□□ 0.89
GTF3A-204ENST00000438571 FAM160B1Q5W0V3 765 aa20.63■□□□□ 0.89
GTF3A-204ENST00000438571 MIS18BP1Q6P0N0 1132 aa20.63■□□□□ 0.89
GTF3A-204ENST00000438571 BLOC1S2Q6QNY1 142 aa20.63■□□□□ 0.89
GTF3A-204ENST00000438571 REXO1Q8N1G1 1221 aaKnown RBP20.63■□□□□ 0.89
GTF3A-204ENST00000438571 TNPO1Q92973 898 aaKnown RBP20.63■□□□□ 0.89
GTF3A-204ENST00000438571 LENG9Q96B70 501 aa20.63■□□□□ 0.89
GTF3A-204ENST00000438571 IGFLR1Q9H665 355 aa20.63■□□□□ 0.89
GTF3A-204ENST00000438571 PCDHGC5Q9Y5F6 944 aa20.63■□□□□ 0.89
GTF3A-204ENST00000438571 PRPF3O43395 683 aaKnown RBP20.62■□□□□ 0.89
GTF3A-204ENST00000438571 RPS6KB1P23443 525 aa20.62■□□□□ 0.89
GTF3A-204ENST00000438571 PLA2G5P39877 138 aa20.62■□□□□ 0.89
GTF3A-204ENST00000438571 PRR16Q569H4 304 aa20.62■□□□□ 0.89
GTF3A-204ENST00000438571 NME8Q8N427 588 aa20.62■□□□□ 0.89
GTF3A-204ENST00000438571 KLHL23Q8NBE8 558 aa20.62■□□□□ 0.89
GTF3A-204ENST00000438571 OSMRQ99650 979 aa20.62■□□□□ 0.89
GTF3A-204ENST00000438571 AGXT2Q9BYV1 514 aa20.62■□□□□ 0.89
GTF3A-204ENST00000438571 NCOA5Q9HCD5 579 aaKnown RBP20.62■□□□□ 0.89
GTF3A-204ENST00000438571 C6orf50Q9HD87 102 aa20.62■□□□□ 0.89
GTF3A-204ENST00000438571 VPS54Q9P1Q0 977 aa20.62■□□□□ 0.89
GTF3A-204ENST00000438571 GPR37L1O60883 481 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 RPS6KA5O75582 802 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 VTNP04004 478 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 CCT2P78371 535 aaKnown RBP20.61■□□□□ 0.89
GTF3A-204ENST00000438571 ZP2Q05996 745 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 KIZQ2M2Z5 673 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 ZNF484Q5JVG2 852 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 FAM228AQ86W67 206 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 CKAP2LQ8IYA6 745 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 SPPL3Q8TCT6 385 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 P2RX5Q93086 422 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 GJA10Q969M2 543 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 PLVAPQ9BX97 442 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 SLC26A6Q9BXS9 759 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 GABBR1Q9UBS5 961 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 MAFBQ9Y5Q3 323 aaPredicted RBP20.61■□□□□ 0.89
GTF3A-204ENST00000438571 ARID2Q68CP9 1835 aa20.61■□□□□ 0.89
GTF3A-204ENST00000438571 CCDC196A0A1B0GTZ2 297 aa20.6■□□□□ 0.89
GTF3A-204ENST00000438571 STAG3L1P0CL83 205 aa20.6■□□□□ 0.89
GTF3A-204ENST00000438571 SARSP49591 514 aaKnown RBP20.6■□□□□ 0.89
GTF3A-204ENST00000438571 CLCN3P51790 818 aa20.6■□□□□ 0.89
GTF3A-204ENST00000438571 SETQ01105 290 aaPredicted RBP20.6■□□□□ 0.89
GTF3A-204ENST00000438571 PUS10Q3MIT2 529 aaKnown RBP20.6■□□□□ 0.89
GTF3A-204ENST00000438571 ZNF746Q6NUN9 644 aaPredicted RBP20.6■□□□□ 0.89
GTF3A-204ENST00000438571 POF1BQ8WVV4 589 aa20.6■□□□□ 0.89
GTF3A-204ENST00000438571 ADAM2Q99965 735 aa20.6■□□□□ 0.89
GTF3A-204ENST00000438571 ST3GAL5Q9UNP4 418 aa20.6■□□□□ 0.89
GTF3A-204ENST00000438571 MBTPS2O43462 519 aa20.59■□□□□ 0.89
GTF3A-204ENST00000438571 UGCGQ16739 394 aa20.59■□□□□ 0.89
GTF3A-204ENST00000438571 FAM102BQ5T8I3 360 aa20.59■□□□□ 0.89
GTF3A-204ENST00000438571 BBXQ8WY36 941 aaPredicted RBP20.59■□□□□ 0.89
GTF3A-204ENST00000438571 ZNF668Q96K58 619 aaPredicted RBP20.59■□□□□ 0.89
GTF3A-204ENST00000438571 LRFN2Q9ULH4 789 aa20.59■□□□□ 0.89
GTF3A-204ENST00000438571 C9IYK1 514 aa20.58■□□□□ 0.89
GTF3A-204ENST00000438571 ZNF862O60290 1169 aa20.58■□□□□ 0.89
GTF3A-204ENST00000438571 GPR32O75388 356 aa20.58■□□□□ 0.89
GTF3A-204ENST00000438571 CIITAP33076 1130 aa20.58■□□□□ 0.89
GTF3A-204ENST00000438571 LRRC71Q8N4P6 559 aa20.58■□□□□ 0.89
GTF3A-204ENST00000438571 CCDC12Q8WUD4 166 aaPredicted RBP20.58■□□□□ 0.89
GTF3A-204ENST00000438571 FAM122AQ96E09 287 aa20.58■□□□□ 0.89
GTF3A-204ENST00000438571 RNF26Q9BY78 433 aaPredicted RBP20.58■□□□□ 0.89
GTF3A-204ENST00000438571 RGS18Q9NS28 235 aa20.58■□□□□ 0.89
GTF3A-204ENST00000438571 TBC1D22BQ9NU19 505 aa20.58■□□□□ 0.89
GTF3A-204ENST00000438571 TECTAO75443 2155 aa20.58■□□□□ 0.88
GTF3A-204ENST00000438571 ZNF318Q5VUA4 2279 aa20.57■□□□□ 0.88
GTF3A-204ENST00000438571 TBKBP1A7MCY6 615 aa20.57■□□□□ 0.88
GTF3A-204ENST00000438571 MSH4O15457 936 aa20.57■□□□□ 0.88
GTF3A-204ENST00000438571 PSAPP07602 524 aa20.57■□□□□ 0.88
GTF3A-204ENST00000438571 FGFR1P11362 822 aa20.57■□□□□ 0.88
GTF3A-204ENST00000438571 IFNAR1P17181 557 aa20.57■□□□□ 0.88
GTF3A-204ENST00000438571 GNA11P29992 359 aa20.57■□□□□ 0.88
GTF3A-204ENST00000438571 PDIA3P30101 505 aaKnown RBP20.57■□□□□ 0.88
GTF3A-204ENST00000438571 TOB2Q14106 344 aaPredicted RBP20.57■□□□□ 0.88
GTF3A-204ENST00000438571 SMAP1Q8IYB5 467 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms