RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 NSUN3Q9H649 340 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-203ENST00000437813 NCOA5Q9HCD5 579 aaKnown RBP16.37■□□□□ 0.21
TNFRSF1A-203ENST00000437813 ZSWIM6Q9HCJ5 1215 aa16.37■□□□□ 0.21
TNFRSF1A-203ENST00000437813 C6orf50Q9HD87 102 aa16.37■□□□□ 0.21
TNFRSF1A-203ENST00000437813 ZNF302Q9NR11 478 aa16.37■□□□□ 0.21
TNFRSF1A-203ENST00000437813 TBC1D22BQ9NU19 505 aa16.37■□□□□ 0.21
TNFRSF1A-203ENST00000437813 GRXCR2A6NFK2 248 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 M0R2N6 131 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 PPFIA3O75145 1194 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 CTNNB1P35222 781 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 ZNF76P36508 570 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 ZNF484Q5JVG2 852 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 FAM160B1Q5W0V3 765 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 PDXDC2PQ6P474 469 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 CCDC12Q8WUD4 166 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 P2RX5Q93086 422 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 UIMC1Q96RL1 719 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 ZNF577Q9BSK1 485 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 C11orf84Q9BUA3 381 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 PLVAPQ9BX97 442 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 SH3GLB2Q9NR46 395 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 RAPGEFL1Q9UHV5 662 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 NOC2LQ9Y3T9 749 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 RWDD3Q9Y3V2 267 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 MRPL42Q9Y6G3 142 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 TRIOO75962 3097 aa16.36■□□□□ 0.21
TNFRSF1A-203ENST00000437813 PLXNA4Q9HCM2 1894 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 BACH1O14867 736 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 ZNF862O60290 1169 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 GPR32O75388 356 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 REC8O95072 547 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 MMP1P03956 469 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 IL9P15248 144 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 DNAJB1P25685 340 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 GNA11P29992 359 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 FGD1P98174 961 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 PAK2Q13177 524 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 BTG3Q14201 252 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 TMEM266Q2M3C6 531 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 PRR16Q569H4 304 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 MIS18BP1Q6P0N0 1132 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 B3GNT9Q6UX72 402 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 RUFY3Q7L099 469 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 SMAP1Q8IYB5 467 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 BBXQ8WY36 941 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 CCDC136Q96JN2 1154 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 NAP1L2Q9ULW6 460 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 PLAGL2Q9UPG8 496 aa16.35■□□□□ 0.21
TNFRSF1A-203ENST00000437813 C9IYK1 514 aa16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 M0QZ92 97 aa16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 MSH4O15457 936 aa16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 ITGB1P05556 798 aa16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 PSMA5P28066 241 aa16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 GATMP50440 423 aa16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 HYAL1Q12794 435 aa16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 DSC3Q14574 896 aa16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 PTCRAQ6ISU1 281 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 C1QTNF1Q9BXJ1 281 aa16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 VPS54Q9P1Q0 977 aa16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 PCDHA10Q9Y5I2 948 aa16.34■□□□□ 0.21
TNFRSF1A-203ENST00000437813 PI4K2BG5E9Z4 385 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 H3BQ06 376 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 SARSP49591 514 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 USP11P51784 963 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 CCT2P78371 535 aaKnown RBP16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 FAM189BP81408 668 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 DLX2Q07687 328 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 CCDC148Q8NFR7 591 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 SPPL3Q8TCT6 385 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 BICD2Q8TD16 824 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 SLC5A5Q92911 643 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 MBOAT7Q96N66 472 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 CEP89Q96ST8 783 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 SLC26A6Q9BXS9 759 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 TM6SF1Q9BZW5 370 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 RGS18Q9NS28 235 aa16.33■□□□□ 0.2
TNFRSF1A-203ENST00000437813 CYP3A7-CYP3A51PA0A087WV96 503 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 PSMD10O75832 226 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 STBD1O95210 358 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 PSAPP07602 524 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 CYP3A7P24462 503 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 GTF2F1P35269 517 aaKnown RBP eCLIP16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 CRYBB1P53674 252 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 UGCGQ16739 394 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 PUS10Q3MIT2 529 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 NAALADL2Q58DX5 795 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 FAM228AQ86W67 206 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 ZNF274Q96GC6 653 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 RIT2Q99578 217 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 LRFN3Q9BTN0 628 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 ADAMTS10Q9H324 1103 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 ALG13Q9NP73 1137 aaKnown RBP16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 GABBR1Q9UBS5 961 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 ST3GAL5Q9UNP4 418 aa16.32■□□□□ 0.2
TNFRSF1A-203ENST00000437813 C19orf67A6NJJ6 358 aa16.31■□□□□ 0.2
TNFRSF1A-203ENST00000437813 WDR64B1ANS9 1081 aa16.31■□□□□ 0.2
TNFRSF1A-203ENST00000437813 TBX10O75333 385 aa16.31■□□□□ 0.2
TNFRSF1A-203ENST00000437813 RPS6KA5O75582 802 aa16.31■□□□□ 0.2
TNFRSF1A-203ENST00000437813 STAG3L1P0CL83 205 aa16.31■□□□□ 0.2
TNFRSF1A-203ENST00000437813 TARBP2Q15633 366 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms