RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 USP11P51784 963 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 EIF3BP55884 814 aaKnown RBP8.07□□□□□ -1.12
CPSF6-202ENST00000435070 ZC2HC1CQ53FD0 456 aaPredicted RBP8.07□□□□□ -1.12
CPSF6-202ENST00000435070 TMEM59LQ9UK28 342 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 ARL2BPQ9Y2Y0 163 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 ATP6V0A2Q9Y487 856 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 NPHP3-ACAD11A0A0J9YXS1 232 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 SSU72P8A0A1W2PR75 194 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 PRPF3O43395 683 aaKnown RBP8.07□□□□□ -1.12
CPSF6-202ENST00000435070 CREB3O43889 395 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 PEX11AO75192 247 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 TPBGLP0DKB5 382 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 PLS1Q14651 629 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 TXNRD1Q16881 649 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 PREBQ9HCU5 417 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 FAM114A2Q9NRY5 505 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 MYH7P12883 1935 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 ASIC2Q16515 512 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 STK32AQ8WU08 396 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 ESR2Q92731 530 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 ARHGEF2Q92974 986 aaKnown RBP8.07□□□□□ -1.12
CPSF6-202ENST00000435070 TCP11L1Q9NUJ3 509 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 KBTBD4Q9NVX7 518 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 NPTXRO95502 500 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 ABCB4P21439 1286 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 KCNA3P22001 575 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 TECP42680 631 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 MYLK4Q86YV6 388 aaPredicted RBP8.07□□□□□ -1.12
CPSF6-202ENST00000435070 TNFRSF25Q93038 417 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 PABPC3Q9H361 631 aaKnown RBP8.07□□□□□ -1.12
CPSF6-202ENST00000435070 CTNNAL1Q9UBT7 734 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 FLOT1O75955 427 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 CIAO1O76071 339 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 STX2P32856 288 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 FAM47AQ5JRC9 791 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 BARGINQ6ZT62 677 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 FAM13CQ8NE31 585 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 AXIN2Q9Y2T1 843 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 SUGT1Q9Y2Z0 365 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 LRRC42Q9Y546 428 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 MYH1P12882 1939 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 CA8P35219 290 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 DR1Q01658 176 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 DEUP1Q05D60 604 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 LETM2Q2VYF4 491 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 GALNTL6Q49A17 601 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 AADACL2Q6P093 401 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 NDNQ99608 321 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 GALNT8Q9NY28 637 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 LRP2BPQ9P2M1 347 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 ZNF219Q9P2Y4 722 aaPredicted RBP8.06□□□□□ -1.12
CPSF6-202ENST00000435070 PTPN22Q9Y2R2 807 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 BCL9LQ86UU0 1499 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 CBX6O95503 412 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 SCG2P13521 617 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 CACNA2D1P54289 1103 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 PTK2Q05397 1052 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 LNPEPQ9UIQ6 1025 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 ATP6V1G1O75348 118 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 EVX2Q03828 476 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 TMEM62Q0P6H9 643 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 FOXB2Q5VYV0 432 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 EXOC3L1Q86VI1 746 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 GBP7Q8N8V2 638 aaPredicted RBP8.06□□□□□ -1.12
CPSF6-202ENST00000435070 TTLL11Q8NHH1 800 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.06□□□□□ -1.12
CPSF6-202ENST00000435070 RAB3IPQ96QF0 476 aaPredicted RBP8.06□□□□□ -1.12
CPSF6-202ENST00000435070 EPB41L4BQ9H329 900 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.06□□□□□ -1.12
CPSF6-202ENST00000435070 NVLO15381 856 aaKnown RBP8.06□□□□□ -1.12
CPSF6-202ENST00000435070 ATP9AO75110 1047 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 GSTT1P30711 240 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 FUT2Q10981 343 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 ALKBH5Q6P6C2 394 aaKnown RBP8.06□□□□□ -1.12
CPSF6-202ENST00000435070 TGS1Q96RS0 853 aaKnown RBP8.06□□□□□ -1.12
CPSF6-202ENST00000435070 MMADHCQ9H3L0 296 aaPredicted RBP8.06□□□□□ -1.12
CPSF6-202ENST00000435070 RXFP1Q9HBX9 757 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 DNAAF2Q9NVR5 837 aaKnown RBP8.06□□□□□ -1.12
CPSF6-202ENST00000435070 GNAZP19086 355 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 MGAT5Q09328 741 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 ECHDC2Q86YB7 292 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 BLIDQ8IZY5 108 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 ADAM33Q9BZ11 813 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 ERVK-5Q9HDB9 667 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 TMOD4Q9NZQ9 345 aa8.06□□□□□ -1.12
CPSF6-202ENST00000435070 GPR75-ASB3A0A0A6YYF3 556 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 CCDC188H7C350 402 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 GNAQP50148 359 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 UBE4AQ14139 1066 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 C6orf118Q5T5N4 469 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 CNNM4Q6P4Q7 775 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 LRRC8CQ8TDW0 803 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 ATP8B4Q8TF62 1192 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 DYDC2Q96IM9 177 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 ZMAT2Q96NC0 199 aaKnown RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 MOV10L1Q9BXT6 1211 aaKnown RBP8.05□□□□□ -1.12
CPSF6-202ENST00000435070 CUEDC2Q9H467 287 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 NMRK1Q9NWW6 199 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 CYP39A1Q9NYL5 469 aa8.05□□□□□ -1.12
CPSF6-202ENST00000435070 ASB3Q9Y575 518 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms