RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 GINS2Q9Y248 185 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 PCDHB12Q9Y5F1 795 aa16.94■□□□□ 0.3
PRKDC-203ENST00000432581 FSD2A1L4K1 749 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 DENND3A2RUS2 1198 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 DDX39AO00148 427 aaKnown RBP16.93■□□□□ 0.3
PRKDC-203ENST00000432581 GPR182O15218 404 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 CCNE2O96020 404 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 NRIP1P48552 1158 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 CLK2P49760 499 aaKnown RBP16.93■□□□□ 0.3
PRKDC-203ENST00000432581 RCAN1P53805 252 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 IRX6P78412 446 aaPredicted RBP16.93■□□□□ 0.3
PRKDC-203ENST00000432581 EXOSC10Q01780 885 aaKnown RBP16.93■□□□□ 0.3
PRKDC-203ENST00000432581 MIS18BP1Q6P0N0 1132 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 PDXDC2PQ6P474 469 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 DHX32Q7L7V1 743 aaKnown RBP16.93■□□□□ 0.3
PRKDC-203ENST00000432581 ADGRD2Q7Z7M1 963 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 KIAA0319LQ8IZA0 1049 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 ZNF302Q9NR11 478 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 CLEC1BQ9P126 229 aa16.93■□□□□ 0.3
PRKDC-203ENST00000432581 NOC2LQ9Y3T9 749 aaKnown RBP16.93■□□□□ 0.3
PRKDC-203ENST00000432581 GOLGA8AA7E2F4 631 aa16.92■□□□□ 0.3
PRKDC-203ENST00000432581 GOLGA8BA8MQT2 603 aa16.92■□□□□ 0.3
PRKDC-203ENST00000432581 GATMP50440 423 aa16.92■□□□□ 0.3
PRKDC-203ENST00000432581 SPOUT1Q5T280 376 aaKnown RBP16.92■□□□□ 0.3
PRKDC-203ENST00000432581 MCTP2Q6DN12 878 aa16.92■□□□□ 0.3
PRKDC-203ENST00000432581 HFE2Q6ZVN8 426 aa16.92■□□□□ 0.3
PRKDC-203ENST00000432581 SLC24A5Q71RS6 500 aa16.92■□□□□ 0.3
PRKDC-203ENST00000432581 ALYREFQ86V81 257 aaKnown RBP16.92■□□□□ 0.3
PRKDC-203ENST00000432581 PLA2G4DQ86XP0 818 aa16.92■□□□□ 0.3
PRKDC-203ENST00000432581 CCDC60Q8IWA6 550 aaPredicted RBP16.92■□□□□ 0.3
PRKDC-203ENST00000432581 ADAM2Q99965 735 aa16.92■□□□□ 0.3
PRKDC-203ENST00000432581 RGS18Q9NS28 235 aa16.92■□□□□ 0.3
PRKDC-203ENST00000432581 TMEM260Q9NX78 707 aa16.92■□□□□ 0.3
PRKDC-203ENST00000432581 BRPF3Q9ULD4 1205 aa16.92■□□□□ 0.3
PRKDC-203ENST00000432581 FAM86B1E9PN63 330 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 IPO5O00410 1097 aaKnown RBP16.91■□□□□ 0.3
PRKDC-203ENST00000432581 MGEA5O60502 916 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 CYP3A4P08684 503 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 FAM86B2P0C5J1 330 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 IBSPP21815 317 aaPredicted RBP16.91■□□□□ 0.3
PRKDC-203ENST00000432581 CRYBB1P53674 252 aaPredicted RBP16.91■□□□□ 0.3
PRKDC-203ENST00000432581 SETQ01105 290 aaPredicted RBP16.91■□□□□ 0.3
PRKDC-203ENST00000432581 KRT32Q14532 448 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 TSGA10IPQ3SY00 556 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 PDE12Q6L8Q7 609 aaKnown RBP16.91■□□□□ 0.3
PRKDC-203ENST00000432581 SWSAP1Q6NVH7 229 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 RBM23Q86U06 439 aaKnown RBP16.91■□□□□ 0.3
PRKDC-203ENST00000432581 MICAL1Q8TDZ2 1067 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 TMEM40Q8WWA1 233 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 EDAQ92838 391 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 FBXL18Q96ME1 805 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 CDCA3Q99618 268 aaPredicted RBP16.91■□□□□ 0.3
PRKDC-203ENST00000432581 TLE6Q9H808 572 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 CDHR5Q9HBB8 845 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 TLR9Q9NR96 1032 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 TBC1D22BQ9NU19 505 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 TCEAL9Q9UHQ7 104 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 ST3GAL5Q9UNP4 418 aa16.91■□□□□ 0.3
PRKDC-203ENST00000432581 KLF18A0A0U1RQI7 1052 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 TBKBP1A7MCY6 615 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 ZBTB42B2RXF5 422 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 C9IYK1 514 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 DHX15O43143 795 aaKnown RBP16.9■□□□□ 0.3
PRKDC-203ENST00000432581 PPFIA3O75145 1194 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 GLP2RO95838 553 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 NHLH1Q02575 133 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 JAKMIP3Q5VZ66 844 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 ZNF746Q6NUN9 644 aaPredicted RBP16.9■□□□□ 0.3
PRKDC-203ENST00000432581 CKAP2LQ8IYA6 745 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 CRYGNQ8WXF5 182 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 BBXQ8WY36 941 aaPredicted RBP16.9■□□□□ 0.3
PRKDC-203ENST00000432581 TCEANC2Q96MN5 208 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 ZNF577Q9BSK1 485 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 ATP6V0A4Q9HBG4 840 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 FAM217BQ9NTX9 383 aaPredicted RBP16.9■□□□□ 0.3
PRKDC-203ENST00000432581 TMEM161AQ9NX61 479 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 ATG2AQ2TAZ0 1938 aa16.9■□□□□ 0.3
PRKDC-203ENST00000432581 IGLV3-22A0A075B6J6 115 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 CCDC196A0A1B0GTZ2 297 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 ESYT2A0FGR8 921 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 LOC730098B7Z3J9 87 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 FGF18O76093 207 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 C22orf31O95567 290 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 HMGB1P09429 215 aaKnown RBP16.89■□□□□ 0.29
PRKDC-203ENST00000432581 ATP4AP20648 1035 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 PFKFB3Q16875 520 aaPredicted RBP16.89■□□□□ 0.29
PRKDC-203ENST00000432581 KIZQ2M2Z5 673 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 FAM102BQ5T8I3 360 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 SMAP1Q8IYB5 467 aaPredicted RBP16.89■□□□□ 0.29
PRKDC-203ENST00000432581 THNSL1Q8IYQ7 743 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 COLGALT1Q8NBJ5 622 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 CCDC12Q8WUD4 166 aaPredicted RBP16.89■□□□□ 0.29
PRKDC-203ENST00000432581 PHF7Q9BWX1 381 aaPredicted RBP16.89■□□□□ 0.29
PRKDC-203ENST00000432581 ELAC1Q9H777 363 aaKnown RBP16.89■□□□□ 0.29
PRKDC-203ENST00000432581 BARX2Q9UMQ3 279 aaPredicted RBP16.89■□□□□ 0.29
PRKDC-203ENST00000432581 CEP131Q9UPN4 1083 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 USP15Q9Y4E8 981 aaPredicted RBP16.89■□□□□ 0.29
PRKDC-203ENST00000432581 PCDHGC5Q9Y5F6 944 aa16.89■□□□□ 0.29
PRKDC-203ENST00000432581 MAFBQ9Y5Q3 323 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms