RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 CASQ1P31415 396 aa21.53■■□□□ 1.04
VRK2-205ENST00000432057 ZNF720Q7Z2F6 126 aa21.53■■□□□ 1.04
VRK2-205ENST00000432057 FRMD5Q7Z6J6 570 aa21.53■■□□□ 1.04
VRK2-205ENST00000432057 SH2D3AQ9BRG2 576 aa21.53■■□□□ 1.04
VRK2-205ENST00000432057 FAM184BQ9ULE4 1060 aa21.53■■□□□ 1.04
VRK2-205ENST00000432057 SRCAPQ6ZRS2 3230 aa21.53■■□□□ 1.04
VRK2-205ENST00000432057 USO1O60763 962 aaKnown RBP21.52■■□□□ 1.04
VRK2-205ENST00000432057 AKAP3O75969 853 aa21.52■■□□□ 1.04
VRK2-205ENST00000432057 ABL1P00519 1130 aa21.52■■□□□ 1.04
VRK2-205ENST00000432057 YWHABP31946 246 aaKnown RBP21.52■■□□□ 1.04
VRK2-205ENST00000432057 SFNP31947 248 aa21.52■■□□□ 1.04
VRK2-205ENST00000432057 CASP4P49662 377 aa21.52■■□□□ 1.04
VRK2-205ENST00000432057 ARHGAP29Q52LW3 1261 aa21.52■■□□□ 1.04
VRK2-205ENST00000432057 ZNF710Q8N1W2 664 aa21.52■■□□□ 1.04
VRK2-205ENST00000432057 CCDC43Q96MW1 224 aaKnown RBP21.52■■□□□ 1.04
VRK2-205ENST00000432057 LSM14BQ9BX40 385 aaKnown RBP21.52■■□□□ 1.04
VRK2-205ENST00000432057 BTBD7Q9P203 1132 aa21.52■■□□□ 1.04
VRK2-205ENST00000432057 ARMCX3Q9UH62 379 aaPredicted RBP21.52■■□□□ 1.04
VRK2-205ENST00000432057 IRF6O14896 467 aa21.52■■□□□ 1.03
VRK2-205ENST00000432057 SLU7O95391 586 aaKnown RBP21.52■■□□□ 1.03
VRK2-205ENST00000432057 KCNA2P16389 499 aa21.52■■□□□ 1.03
VRK2-205ENST00000432057 ARHGAP25P42331 645 aa21.52■■□□□ 1.03
VRK2-205ENST00000432057 PSMC5P62195 406 aa21.52■■□□□ 1.03
VRK2-205ENST00000432057 KCNH2Q12809 1159 aa21.52■■□□□ 1.03
VRK2-205ENST00000432057 NAA30Q147X3 362 aaPredicted RBP21.52■■□□□ 1.03
VRK2-205ENST00000432057 LBX2Q6XYB7 198 aa21.52■■□□□ 1.03
VRK2-205ENST00000432057 BAP1Q92560 729 aa21.52■■□□□ 1.03
VRK2-205ENST00000432057 L3MBTL3Q96JM7 780 aaPredicted RBP21.52■■□□□ 1.03
VRK2-205ENST00000432057 CRACR2AQ9BSW2 395 aa21.52■■□□□ 1.03
VRK2-205ENST00000432057 NHEJ1Q9H9Q4 299 aaPredicted RBP21.52■■□□□ 1.03
VRK2-205ENST00000432057 A0A0G2JLL6 359 aaPredicted RBP21.51■■□□□ 1.03
VRK2-205ENST00000432057 LRRC53A6NM62 1247 aa21.51■■□□□ 1.03
VRK2-205ENST00000432057 BACH1O14867 736 aa21.51■■□□□ 1.03
VRK2-205ENST00000432057 SLC16A3O15427 465 aaKnown RBP21.51■■□□□ 1.03
VRK2-205ENST00000432057 URI1O94763 535 aaPredicted RBP21.51■■□□□ 1.03
VRK2-205ENST00000432057 RPL13P26373 211 aaKnown RBP21.51■■□□□ 1.03
VRK2-205ENST00000432057 EPHX2P34913 555 aa21.51■■□□□ 1.03
VRK2-205ENST00000432057 HERVK_113P62684 666 aa21.51■■□□□ 1.03
VRK2-205ENST00000432057 UTP14CQ5TAP6 766 aaKnown RBP21.51■■□□□ 1.03
VRK2-205ENST00000432057 PLA2G4FQ68DD2 849 aa21.51■■□□□ 1.03
VRK2-205ENST00000432057 ZNF746Q6NUN9 644 aaPredicted RBP21.51■■□□□ 1.03
VRK2-205ENST00000432057 STXBP4Q6ZWJ1 553 aa21.51■■□□□ 1.03
VRK2-205ENST00000432057 USP50Q70EL3 339 aaPredicted RBP21.51■■□□□ 1.03
VRK2-205ENST00000432057 TRMT1LQ7Z2T5 733 aaKnown RBP21.51■■□□□ 1.03
VRK2-205ENST00000432057 PRRT2Q7Z6L0 340 aaPredicted RBP21.51■■□□□ 1.03
VRK2-205ENST00000432057 GPIHBP1Q8IV16 184 aa21.51■■□□□ 1.03
VRK2-205ENST00000432057 C4orf19Q8IY42 314 aa21.51■■□□□ 1.03
VRK2-205ENST00000432057 CHST13Q8NET6 341 aa21.51■■□□□ 1.03
VRK2-205ENST00000432057 KIF5CO60282 957 aa21.5■■□□□ 1.03
VRK2-205ENST00000432057 HNRNPH3P31942 346 aaKnown RBP21.5■■□□□ 1.03
VRK2-205ENST00000432057 CYLC1P35663 651 aaPredicted RBP21.5■■□□□ 1.03
VRK2-205ENST00000432057 CDK17Q00537 523 aa21.5■■□□□ 1.03
VRK2-205ENST00000432057 PPATQ06203 517 aa21.5■■□□□ 1.03
VRK2-205ENST00000432057 NCBP1Q09161 790 aaKnown RBP21.5■■□□□ 1.03
VRK2-205ENST00000432057 TTLL12Q14166 644 aaPredicted RBP21.5■■□□□ 1.03
VRK2-205ENST00000432057 DPY19L2Q6NUT2 758 aa21.5■■□□□ 1.03
VRK2-205ENST00000432057 PDXDC1Q6P996 788 aa21.5■■□□□ 1.03
VRK2-205ENST00000432057 RRAGAQ7L523 313 aa21.5■■□□□ 1.03
VRK2-205ENST00000432057 MOV10L1Q9BXT6 1211 aaKnown RBP21.5■■□□□ 1.03
VRK2-205ENST00000432057 PLAGL2Q9UPG8 496 aa21.5■■□□□ 1.03
VRK2-205ENST00000432057 K7ENM7 598 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 NOL4O94818 638 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 PLEKP08567 350 aaPredicted RBP21.49■■□□□ 1.03
VRK2-205ENST00000432057 EPB41P11171 864 aaKnown RBP21.49■■□□□ 1.03
VRK2-205ENST00000432057 NF2P35240 595 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 APBA1Q02410 837 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 CACNA2D4Q7Z3S7 1137 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 ERO1BQ86YB8 467 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 ANKRD13AQ8IZ07 590 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 PROCA1Q8NCQ7 364 aaPredicted RBP21.49■■□□□ 1.03
VRK2-205ENST00000432057 RDM1Q8NG50 284 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 SENP7Q9BQF6 1050 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 TELO2Q9Y4R8 837 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 MAFGO15525 162 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 PPP1R37O75864 691 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 CNTN2Q02246 1040 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 NFIL3Q16649 462 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 DCAF17Q5H9S7 520 aaPredicted RBP21.49■■□□□ 1.03
VRK2-205ENST00000432057 ANKRD35Q8N283 1001 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 LRRN4CLQ8ND94 238 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 ERO1AQ96HE7 468 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 STRA6Q9BX79 667 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 EDEM3Q9BZQ6 932 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 MAF1Q9H063 256 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 NLRC4Q9NPP4 1024 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 CEP72Q9P209 647 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.49■■□□□ 1.03
VRK2-205ENST00000432057 PCDHB13Q9Y5F0 798 aa21.49■■□□□ 1.03
VRK2-205ENST00000432057 V9GYY5 206 aaPredicted RBP21.49■■□□□ 1.03
VRK2-205ENST00000432057 SPDYE5A6NIY4 337 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 SORBS3O60504 671 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 AFPP02771 609 aaKnown RBP21.48■■□□□ 1.03
VRK2-205ENST00000432057 XRCC5P13010 732 aaKnown RBP21.48■■□□□ 1.03
VRK2-205ENST00000432057 NPEPPSP55786 919 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 GPR162Q16538 588 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 XKR9Q5GH70 373 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 ZNF569Q5MCW4 686 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 RIOX2Q8IUF8 465 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 CCDC170Q8IYT3 715 aa21.48■■□□□ 1.03
VRK2-205ENST00000432057 ARHGAP20Q9P2F6 1191 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms