RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 RBM23Q86U06 439 aaKnown RBP16.19■□□□□ 0.18
SMARCE1-205ENST00000431889 KIAA0319LQ8IZA0 1049 aa16.19■□□□□ 0.18
SMARCE1-205ENST00000431889 PABPC5Q96DU9 382 aaKnown RBP16.19■□□□□ 0.18
SMARCE1-205ENST00000431889 OSMRQ99650 979 aa16.19■□□□□ 0.18
SMARCE1-205ENST00000431889 C11orf84Q9BUA3 381 aaPredicted RBP16.19■□□□□ 0.18
SMARCE1-205ENST00000431889 SAMM50Q9Y512 469 aa16.19■□□□□ 0.18
SMARCE1-205ENST00000431889 C5orf67F2Z3F1 127 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 CHMP2AO43633 222 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 ITGB1P05556 798 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 RPS6KB1P23443 525 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 HSPA4P34932 840 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 TMEM31Q5JXX7 168 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 FAM102BQ5T8I3 360 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 FAM160B1Q5W0V3 765 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 MIS18BP1Q6P0N0 1132 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 CRIPAKQ8N1N5 446 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 KLHL23Q8NBE8 558 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 ATP8B4Q8TF62 1192 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 CLP1Q92989 425 aaKnown RBP16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 GABBR1Q9UBS5 961 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 LRFN2Q9ULH4 789 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 PLAGL2Q9UPG8 496 aa16.18■□□□□ 0.18
SMARCE1-205ENST00000431889 EDIL3O43854 480 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 HBP1O60381 514 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 TBX10O75333 385 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 RPS6KA5O75582 802 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 HMGB1P09429 215 aaKnown RBP16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 CLCN3P51790 818 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 RBM10P98175 930 aaKnown RBP16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 SPOUT1Q5T280 376 aaKnown RBP16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 NPAS4Q8IUM7 802 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 REXO1Q8N1G1 1221 aaKnown RBP16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 LRRC71Q8N4P6 559 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 CRYGNQ8WXF5 182 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 ADAM2Q99965 735 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 ZMYND12Q9H0C1 365 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 C6orf50Q9HD87 102 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 ERVK-5Q9HDB9 667 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 ST3GAL5Q9UNP4 418 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 FNDC1Q4ZHG4 1894 aaPredicted RBP16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 hCG_1984214I3L0E3 225 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 PRPF3O43395 683 aaKnown RBP16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 FGFR1P11362 822 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 ZNF713Q8N859 430 aaPredicted RBP16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 CCDC136Q96JN2 1154 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 SH2D3AQ9BRG2 576 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 TCEAL9Q9UHQ7 104 aa16.17■□□□□ 0.18
SMARCE1-205ENST00000431889 DENND3A2RUS2 1198 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 TMEM150BA6NC51 233 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 TBKBP1A7MCY6 615 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 PI4K2BG5E9Z4 385 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 C22orf31O95567 290 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 RB1P06400 928 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 FGFR4P22455 802 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 AKAP17AQ02040 695 aaKnown RBP16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 STK3Q13188 491 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 NTRK3Q16288 839 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 UGCGQ16739 394 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 NIPA1Q7RTP0 329 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 FAM228AQ86W67 206 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 SPPL3Q8TCT6 385 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 POF1BQ8WVV4 589 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 KCNB2Q92953 911 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 AIFM3Q96NN9 605 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 FTHL17Q9BXU8 183 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 PCDHB7Q9Y5E2 793 aa16.16■□□□□ 0.18
SMARCE1-205ENST00000431889 CCDC196A0A1B0GTZ2 297 aa16.15■□□□□ 0.18
SMARCE1-205ENST00000431889 PER2O15055 1255 aa16.15■□□□□ 0.18
SMARCE1-205ENST00000431889 MMP1P03956 469 aa16.15■□□□□ 0.18
SMARCE1-205ENST00000431889 CYP3A4P08684 503 aa16.15■□□□□ 0.18
SMARCE1-205ENST00000431889 PDIA3P30101 505 aaKnown RBP16.15■□□□□ 0.18
SMARCE1-205ENST00000431889 CMTR2Q8IYT2 770 aaKnown RBP16.15■□□□□ 0.18
SMARCE1-205ENST00000431889 TNPO1Q92973 898 aaKnown RBP16.15■□□□□ 0.18
SMARCE1-205ENST00000431889 LENG9Q96B70 501 aa16.15■□□□□ 0.18
SMARCE1-205ENST00000431889 MSH4O15457 936 aa16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 CSDE1O75534 798 aaKnown RBP16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 STAG3L1P0CL83 205 aa16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 PBX3P40426 434 aa16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 NRIP1P48552 1158 aa16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 SARSP49591 514 aaKnown RBP16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 SLC26A2P50443 739 aa16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 TOB2Q14106 344 aaPredicted RBP16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 ZNF484Q5JVG2 852 aa16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 NME8Q8N427 588 aa16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 FAM122AQ96E09 287 aa16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 GLT8D2Q9H1C3 349 aa16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 AKT3Q9Y243 479 aa16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 RWDD3Q9Y3V2 267 aa16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 MAFBQ9Y5Q3 323 aaPredicted RBP16.14■□□□□ 0.17
SMARCE1-205ENST00000431889 ESYT2A0FGR8 921 aa16.13■□□□□ 0.17
SMARCE1-205ENST00000431889 ZNF862O60290 1169 aa16.13■□□□□ 0.17
SMARCE1-205ENST00000431889 GPR32O75388 356 aa16.13■□□□□ 0.17
SMARCE1-205ENST00000431889 PSAPP07602 524 aa16.13■□□□□ 0.17
SMARCE1-205ENST00000431889 NDUFV1P49821 464 aa16.13■□□□□ 0.17
SMARCE1-205ENST00000431889 NLRP11P59045 1033 aaKnown RBP16.13■□□□□ 0.17
SMARCE1-205ENST00000431889 NLRP5P59047 1200 aa16.13■□□□□ 0.17
SMARCE1-205ENST00000431889 ZP2Q05996 745 aa16.13■□□□□ 0.17
SMARCE1-205ENST00000431889 CTC1Q2NKJ3 1217 aa16.13■□□□□ 0.17
SMARCE1-205ENST00000431889 ZNF746Q6NUN9 644 aaPredicted RBP16.13■□□□□ 0.17
SMARCE1-205ENST00000431889 EFCAB12Q6NXP0 572 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms