RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 FRMD5Q7Z6J6 570 aa23.94■■□□□ 1.42
CNEP1R1-202ENST00000427478 CLMNQ96JQ2 1002 aa23.94■■□□□ 1.42
CNEP1R1-202ENST00000427478 NHEJ1Q9H9Q4 299 aaPredicted RBP23.94■■□□□ 1.42
CNEP1R1-202ENST00000427478 ARMCX3Q9UH62 379 aaPredicted RBP23.94■■□□□ 1.42
CNEP1R1-202ENST00000427478 UBE4BO95155 1302 aa23.94■■□□□ 1.42
CNEP1R1-202ENST00000427478 KIF5CO60282 957 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 USO1O60763 962 aaKnown RBP23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 AKAP3O75969 853 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 ABL1P00519 1130 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 RPL13P26373 211 aaKnown RBP23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 STXBP4Q6ZWJ1 553 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 MOB2Q70IA6 237 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 CDCA5Q96FF9 252 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 CCDC43Q96MW1 224 aaKnown RBP23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 CRACR2AQ9BSW2 395 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 LSM14BQ9BX40 385 aaKnown RBP23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 RGS20O76081 388 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 CASP4P49662 377 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 PSMC5P62195 406 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 KCNH2Q12809 1159 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 NAA30Q147X3 362 aaPredicted RBP23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 DPY19L2Q6NUT2 758 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 RRAGAQ7L523 313 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 ZNF710Q8N1W2 664 aa23.93■■□□□ 1.42
CNEP1R1-202ENST00000427478 LRRC53A6NM62 1247 aa23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 IRF6O14896 467 aa23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 CYLC1P35663 651 aaPredicted RBP23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 ARHGAP25P42331 645 aa23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 UTP14CQ5TAP6 766 aaKnown RBP23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 LBX2Q6XYB7 198 aa23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 CACNA2D4Q7Z3S7 1137 aa23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 C4orf19Q8IY42 314 aa23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 BAP1Q92560 729 aa23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 PLAGL2Q9UPG8 496 aa23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 EPB41P11171 864 aaKnown RBP23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 KCNA2P16389 499 aa23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 NCBP1Q09161 790 aaKnown RBP23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 TTLL12Q14166 644 aaPredicted RBP23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 GPIHBP1Q8IV16 184 aa23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 BTBD7Q9P203 1132 aa23.92■■□□□ 1.42
CNEP1R1-202ENST00000427478 BACH1O14867 736 aa23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 SLC16A3O15427 465 aaKnown RBP23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 MAFGO15525 162 aa23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 HNRNPH3P31942 346 aaKnown RBP23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 EPHX2P34913 555 aa23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 HERVK_113P62684 666 aa23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 CDK17Q00537 523 aa23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 DCAF17Q5H9S7 520 aaPredicted RBP23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 PLA2G4FQ68DD2 849 aa23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 ZNF746Q6NUN9 644 aaPredicted RBP23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 CHST13Q8NET6 341 aa23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 ERO1AQ96HE7 468 aa23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 MOV10L1Q9BXT6 1211 aaKnown RBP23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 ARID2Q68CP9 1835 aa23.91■■□□□ 1.42
CNEP1R1-202ENST00000427478 K7ENM7 598 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 PLEKP08567 350 aaPredicted RBP23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 NF2P35240 595 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 PPATQ06203 517 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 ZNF569Q5MCW4 686 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 USP50Q70EL3 339 aaPredicted RBP23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 CCDC170Q8IYT3 715 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 ANKRD35Q8N283 1001 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 NLRC4Q9NPP4 1024 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 PCDHB13Q9Y5F0 798 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 V9GYY5 206 aaPredicted RBP23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 A0A0G2JLL6 359 aaPredicted RBP23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 NOL4O94818 638 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 XRCC5P13010 732 aaKnown RBP23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 APBA1Q02410 837 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 PDXDC1Q6P996 788 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 PRRT2Q7Z6L0 340 aaPredicted RBP23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 ANKRD13AQ8IZ07 590 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 EDEM3Q9BZQ6 932 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 CEP72Q9P209 647 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 PCDHA10Q9Y5I2 948 aa23.9■■□□□ 1.42
CNEP1R1-202ENST00000427478 AFPP02771 609 aaKnown RBP23.89■■□□□ 1.42
CNEP1R1-202ENST00000427478 ERO1BQ86YB8 467 aa23.89■■□□□ 1.42
CNEP1R1-202ENST00000427478 LRRN4CLQ8ND94 238 aa23.89■■□□□ 1.42
CNEP1R1-202ENST00000427478 RDM1Q8NG50 284 aa23.89■■□□□ 1.42
CNEP1R1-202ENST00000427478 L3MBTL3Q96JM7 780 aaPredicted RBP23.89■■□□□ 1.42
CNEP1R1-202ENST00000427478 SENP7Q9BQF6 1050 aa23.89■■□□□ 1.42
CNEP1R1-202ENST00000427478 METTL14Q9HCE5 456 aaKnown RBP23.89■■□□□ 1.42
CNEP1R1-202ENST00000427478 ARHGAP20Q9P2F6 1191 aa23.89■■□□□ 1.42
CNEP1R1-202ENST00000427478 LARSQ9P2J5 1176 aaKnown RBP23.89■■□□□ 1.42
CNEP1R1-202ENST00000427478 TRIM10Q9UDY6 481 aa23.89■■□□□ 1.42
CNEP1R1-202ENST00000427478 SORBS3O60504 671 aa23.89■■□□□ 1.41
CNEP1R1-202ENST00000427478 PPP1R37O75864 691 aa23.89■■□□□ 1.41
CNEP1R1-202ENST00000427478 KRT83P78385 493 aa23.89■■□□□ 1.41
CNEP1R1-202ENST00000427478 CNTN2Q02246 1040 aa23.89■■□□□ 1.41
CNEP1R1-202ENST00000427478 SP4Q02446 784 aa23.89■■□□□ 1.41
CNEP1R1-202ENST00000427478 XKR9Q5GH70 373 aa23.89■■□□□ 1.41
CNEP1R1-202ENST00000427478 TCERG1LQ5VWI1 586 aa23.89■■□□□ 1.41
CNEP1R1-202ENST00000427478 HS2ST1Q7LGA3 356 aa23.89■■□□□ 1.41
CNEP1R1-202ENST00000427478 PROCA1Q8NCQ7 364 aaPredicted RBP23.89■■□□□ 1.41
CNEP1R1-202ENST00000427478 TFR2Q9UP52 801 aa23.89■■□□□ 1.41
CNEP1R1-202ENST00000427478 TELO2Q9Y4R8 837 aa23.89■■□□□ 1.41
CNEP1R1-202ENST00000427478 EIF3CLB5ME19 914 aaKnown RBP23.88■■□□□ 1.41
CNEP1R1-202ENST00000427478 STAM2O75886 525 aa23.88■■□□□ 1.41
CNEP1R1-202ENST00000427478 NPEPPSP55786 919 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms