RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 REEP2Q9BRK0 252 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 NAT10Q9H0A0 1025 aaKnown RBP9.97□□□□□ -0.81
HPS4-204ENST00000422379 MAGEF1Q9HAY2 307 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 BMP2KQ9NSY1 1161 aaPredicted RBP9.97□□□□□ -0.81
HPS4-204ENST00000422379 GDAQ9Y2T3 454 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.97□□□□□ -0.81
HPS4-204ENST00000422379 BECN2A8MW95 431 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 ZBTB42B2RXF5 422 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 GH1P01241 217 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 ZNF286BP0CG31 522 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 MUTP22033 750 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 MARK3P27448 753 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 ZNF75DP51815 510 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 STK4Q13043 487 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 IRF5Q13568 498 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 IQSEC1Q6DN90 963 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 PPTC7Q8NI37 304 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 AFAP1L1Q8TED9 768 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 BPIFA3Q9BQP9 254 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 TRIM5Q9C035 493 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 ZNF302Q9NR11 478 aa9.97□□□□□ -0.81
HPS4-204ENST00000422379 CASP8AP2Q9UKL3 1982 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 FRMD3A2A2Y4 597 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 SFI1A8K8P3 1242 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 DYNC1LI2O43237 492 aaPredicted RBP9.96□□□□□ -0.81
HPS4-204ENST00000422379 ADCY3O60266 1144 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 MMP3P08254 477 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 HOXD8P13378 290 aaPredicted RBP9.96□□□□□ -0.81
HPS4-204ENST00000422379 PRKAR2AP13861 404 aaKnown RBP9.96□□□□□ -0.81
HPS4-204ENST00000422379 ASIC1P78348 528 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 MAP2K1Q02750 393 aaPredicted RBP9.96□□□□□ -0.81
HPS4-204ENST00000422379 LAMC2Q13753 1193 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 KIF22Q14807 665 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 MAP3K21Q5TCX8 1036 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 SARM1Q6SZW1 724 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 SPC24Q8NBT2 197 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 KIAA0895Q8NCT3 520 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 OR6J1Q8NGC5 347 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 ZNF830Q96NB3 372 aaPredicted RBP9.96□□□□□ -0.81
HPS4-204ENST00000422379 GSDMAQ96QA5 445 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 C16orf70Q9BSU1 422 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 RNPEPQ9H4A4 650 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 GPRC5CQ9NQ84 441 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 DBR1Q9UK59 544 aaKnown RBP9.96□□□□□ -0.81
HPS4-204ENST00000422379 PCDHA2Q9Y5H9 948 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 STK24Q9Y6E0 443 aa9.96□□□□□ -0.81
HPS4-204ENST00000422379 PPP1R3GB7ZBB8 358 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 NOP56O00567 594 aaKnown RBP9.95□□□□□ -0.82
HPS4-204ENST00000422379 RHOBTB3O94955 611 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 OATP04181 439 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 LGALS2P05162 132 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 STAT5BP51692 787 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 CASP5P51878 434 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 BEX3Q00994 111 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 TARBP2Q15633 366 aaKnown RBP9.95□□□□□ -0.82
HPS4-204ENST00000422379 PADI6Q6TGC4 694 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 MAEAQ7L5Y9 396 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 TLK2Q86UE8 772 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 ATP6V0A1Q93050 837 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 FIZ1Q96SL8 496 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 XPNPEP1Q9NQW7 623 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 TCEAL9Q9UHQ7 104 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 MAPK8IP1Q9UQF2 711 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 PTCH2Q9Y6C5 1203 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 EMSYQ7Z589 1322 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 A6NJR5 290 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 ZNF500O60304 480 aaPredicted RBP9.95□□□□□ -0.82
HPS4-204ENST00000422379 USO1O60763 962 aaKnown RBP9.95□□□□□ -0.82
HPS4-204ENST00000422379 SMC2O95347 1197 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 MYL1P05976 194 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 IDEP14735 1019 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 COASYQ13057 564 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 KCNB1Q14721 858 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 PLCB4Q15147 1175 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 XKR9Q5GH70 373 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 UNC13DQ70J99 1090 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.95□□□□□ -0.82
HPS4-204ENST00000422379 TRAPPC12Q8WVT3 735 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 KAT2BQ92831 832 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 ERO1AQ96HE7 468 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 CCDC34Q96HJ3 373 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 HSD3B7Q9H2F3 369 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 IKZF4Q9H2S9 585 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 PDLIM7Q9NR12 457 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 CYP26B1Q9NR63 512 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 ANKEF1Q9NU02 776 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 TBC1D7Q9P0N9 293 aa9.95□□□□□ -0.82
HPS4-204ENST00000422379 SEPT9Q9UHD8 586 aaPredicted RBP9.95□□□□□ -0.82
HPS4-204ENST00000422379 HOOK1Q9UJC3 728 aaKnown RBP9.95□□□□□ -0.82
HPS4-204ENST00000422379 ARID2Q68CP9 1835 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 SYNRGQ9UMZ2 1314 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 ARHGEF35A5YM69 484 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 PGK1P00558 417 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 PRCPP42785 496 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 PMS1P54277 932 aaKnown RBP9.94□□□□□ -0.82
HPS4-204ENST00000422379 DRP2Q13474 957 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 HIC1Q14526 733 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 NCAPHQ15003 741 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 LRRC41Q15345 812 aa9.94□□□□□ -0.82
HPS4-204ENST00000422379 MTERF2Q49AM1 385 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms