RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 COL1A2P08123 1366 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 PIEZO1Q92508 2521 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 ZNF318Q5VUA4 2279 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 SMCO2A6NFE2 343 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 BACH1O14867 736 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 MGEA5O60502 916 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 RPS6KA5O75582 802 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 CCNE2O96020 404 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 ZNF76P36508 570 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 MRE11P49959 708 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 UBE3AQ05086 875 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 AP3B2Q13367 1082 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 ZNF484Q5JVG2 852 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 RBM23Q86U06 439 aaKnown RBP19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 ATP8B4Q8TF62 1192 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 ADAM2Q99965 735 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 CDHR5Q9HBB8 845 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 ANO2Q9NQ90 1003 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 AAASQ9NRG9 546 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 RGS18Q9NS28 235 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 C1orf112Q9NSG2 853 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 BARHL2Q9NY43 387 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 GINS2Q9Y248 185 aa19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 NOC2LQ9Y3T9 749 aaKnown RBP19.2■□□□□ 0.66
UPF3AP3-201ENST00000420996 DENND3A2RUS2 1198 aa19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 DDX39AO00148 427 aaKnown RBP19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 PPFIA3O75145 1194 aa19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 GLP2RO95838 553 aa19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 CLK2P49760 499 aaKnown RBP19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 RTN1Q16799 776 aa19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 RNF20Q5VTR2 975 aa19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 SLC24A5Q71RS6 500 aa19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 NEK1Q96PY6 1258 aa19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 TLE6Q9H808 572 aa19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 TMEM260Q9NX78 707 aa19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 TECTAO75443 2155 aa19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 MYH9P35579 1960 aaKnown RBP19.19■□□□□ 0.66
UPF3AP3-201ENST00000420996 TBKBP1A7MCY6 615 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 LOC730098B7Z3J9 87 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 C9IYK1 514 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 GPR182O15218 404 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 ZBTB43O43298 467 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 IBSPP21815 317 aaPredicted RBP19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 EXOSC10Q01780 885 aaKnown RBP19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 SPOUT1Q5T280 376 aaKnown RBP19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 MIS18BP1Q6P0N0 1132 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 PDXDC2PQ6P474 469 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 BMP8AQ7Z5Y6 402 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 CCDC60Q8IWA6 550 aaPredicted RBP19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 MICAL1Q8TDZ2 1067 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 TMEM40Q8WWA1 233 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 ZNF302Q9NR11 478 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 BRPF3Q9ULD4 1205 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 BARX2Q9UMQ3 279 aaPredicted RBP19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 ST3GAL5Q9UNP4 418 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 PCDHGC5Q9Y5F6 944 aa19.18■□□□□ 0.66
UPF3AP3-201ENST00000420996 FSD2A1L4K1 749 aa19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 ZBTB42B2RXF5 422 aa19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 FAM86B1E9PN63 330 aa19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 DHX15O43143 795 aaKnown RBP19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 FAM86B2P0C5J1 330 aa19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 CRYBB1P53674 252 aaPredicted RBP19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 CBX2Q14781 532 aaPredicted RBP19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 FAM102BQ5T8I3 360 aa19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 SWSAP1Q6NVH7 229 aa19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 DHX32Q7L7V1 743 aaKnown RBP19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 PLA2G4DQ86XP0 818 aa19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 TLR9Q9NR96 1032 aa19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 USP15Q9Y4E8 981 aaPredicted RBP19.17■□□□□ 0.66
UPF3AP3-201ENST00000420996 IPO5O00410 1097 aaKnown RBP19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 FGF18O76093 207 aa19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 CYP3A4P08684 503 aa19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 ATP4AP20648 1035 aa19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 IRX6P78412 446 aaPredicted RBP19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 FAM189BP81408 668 aa19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 PDE12Q6L8Q7 609 aaKnown RBP19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 TRIM67Q6ZTA4 783 aa19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 CDCA3Q99618 268 aaPredicted RBP19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 PHF7Q9BWX1 381 aaPredicted RBP19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 TYW1Q9NV66 732 aaKnown RBP19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 TMEM161AQ9NX61 479 aa19.16■□□□□ 0.66
UPF3AP3-201ENST00000420996 IGLV3-22A0A075B6J6 115 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 TMEM221A6NGB7 291 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 GOLGA8AA7E2F4 631 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 GOLGA8BA8MQT2 603 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 M0R296 226 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 PER2O15055 1255 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 C22orf31O95567 290 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 ERVFC1P60507 584 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 KIZQ2M2Z5 673 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 JAKMIP3Q5VZ66 844 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 FAM228AQ86W67 206 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 THNSL1Q8IYQ7 743 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 COLGALT1Q8NBJ5 622 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 CRYGNQ8WXF5 182 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 BBXQ8WY36 941 aaPredicted RBP19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 TCEANC2Q96MN5 208 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 ELAC1Q9H777 363 aaKnown RBP19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 ATP6V0A4Q9HBG4 840 aa19.15■□□□□ 0.66
UPF3AP3-201ENST00000420996 FAM217BQ9NTX9 383 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms