RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 TIPINQ9BVW5 301 aa23.02■■□□□ 1.28
CASC3-203ENST00000418132 SEMA6BQ9H3T3 888 aa23.02■■□□□ 1.28
CASC3-203ENST00000418132 PARVGQ9HBI0 331 aa23.02■■□□□ 1.28
CASC3-203ENST00000418132 SEL1LQ9UBV2 794 aa23.02■■□□□ 1.28
CASC3-203ENST00000418132 ARID2Q68CP9 1835 aa23.02■■□□□ 1.27
CASC3-203ENST00000418132 YY1P25490 414 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 NPEPPSP55786 919 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 XKR3Q5GH77 459 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 PLA2G4FQ68DD2 849 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 FOXR2Q6PJQ5 311 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 DAW1Q8N136 415 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 AFAP1L1Q8TED9 768 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 GPR20Q99678 358 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 DUSP9Q99956 384 aaKnown RBP23.01■■□□□ 1.27
CASC3-203ENST00000418132 POLD4Q9HCU8 107 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 AOC2O75106 756 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 ATP4AP20648 1035 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 CDC25BP30305 580 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 HSDL1Q3SXM5 330 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 HSP90AA4PQ58FG1 418 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 ANKRD40Q6AI12 368 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 SH2D3AQ9BRG2 576 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 ABHD16BQ9H3Z7 469 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 IFNKQ9P0W0 207 aa23.01■■□□□ 1.27
CASC3-203ENST00000418132 SFI1A8K8P3 1242 aa23■■□□□ 1.27
CASC3-203ENST00000418132 USO1O60763 962 aaKnown RBP23■■□□□ 1.27
CASC3-203ENST00000418132 HIP1RO75146 1068 aa23■■□□□ 1.27
CASC3-203ENST00000418132 KIF20AO95235 890 aa23■■□□□ 1.27
CASC3-203ENST00000418132 CDK11BP21127 795 aaKnown RBP23■■□□□ 1.27
CASC3-203ENST00000418132 TCF7P36402 384 aaPredicted RBP23■■□□□ 1.27
CASC3-203ENST00000418132 TMEM63BQ5T3F8 832 aa23■■□□□ 1.27
CASC3-203ENST00000418132 EPM2AIP1Q7L775 607 aaPredicted RBP23■■□□□ 1.27
CASC3-203ENST00000418132 SCFD1Q8WVM8 642 aa23■■□□□ 1.27
CASC3-203ENST00000418132 COPS5Q92905 334 aa23■■□□□ 1.27
CASC3-203ENST00000418132 TRIM47Q96LD4 638 aa23■■□□□ 1.27
CASC3-203ENST00000418132 XPO4Q9C0E2 1151 aaKnown RBP23■■□□□ 1.27
CASC3-203ENST00000418132 ZKSCAN5Q9Y2L8 839 aa23■■□□□ 1.27
CASC3-203ENST00000418132 SERPINC1P01008 464 aa23■■□□□ 1.27
CASC3-203ENST00000418132 FAM160B1Q5W0V3 765 aa23■■□□□ 1.27
CASC3-203ENST00000418132 TRMT1LQ7Z2T5 733 aaKnown RBP23■■□□□ 1.27
CASC3-203ENST00000418132 MYCT1Q8N699 235 aa23■■□□□ 1.27
CASC3-203ENST00000418132 SOCS4Q8WXH5 440 aa23■■□□□ 1.27
CASC3-203ENST00000418132 CEP170P1Q96L14 293 aa23■■□□□ 1.27
CASC3-203ENST00000418132 GJD2Q9UKL4 321 aa23■■□□□ 1.27
CASC3-203ENST00000418132 MYH11P35749 1972 aa22.99■■□□□ 1.27
CASC3-203ENST00000418132 LGR5O75473 907 aa22.99■■□□□ 1.27
CASC3-203ENST00000418132 ECM2O94769 699 aaPredicted RBP22.99■■□□□ 1.27
CASC3-203ENST00000418132 OATP04181 439 aa22.99■■□□□ 1.27
CASC3-203ENST00000418132 STAT5BP51692 787 aa22.99■■□□□ 1.27
CASC3-203ENST00000418132 CASP5P51878 434 aa22.99■■□□□ 1.27
CASC3-203ENST00000418132 LRRC63Q05C16 580 aa22.99■■□□□ 1.27
CASC3-203ENST00000418132 IRF5Q13568 498 aa22.99■■□□□ 1.27
CASC3-203ENST00000418132 NOC3LQ8WTT2 800 aaKnown RBP22.99■■□□□ 1.27
CASC3-203ENST00000418132 SPATA33Q96N06 139 aa22.99■■□□□ 1.27
CASC3-203ENST00000418132 FIZ1Q96SL8 496 aa22.99■■□□□ 1.27
CASC3-203ENST00000418132 MGAMO43451 1857 aa22.99■■□□□ 1.27
CASC3-203ENST00000418132 NOP56O00567 594 aaKnown RBP22.98■■□□□ 1.27
CASC3-203ENST00000418132 TNPO2O14787 897 aaKnown RBP22.98■■□□□ 1.27
CASC3-203ENST00000418132 ARHGAP1Q07960 439 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 ACVR2BQ13705 512 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 IRF2BP1Q8IU81 584 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 THAP9Q9H5L6 903 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 MRPL44Q9H9J2 332 aaKnown RBP22.98■■□□□ 1.27
CASC3-203ENST00000418132 CYP26B1Q9NR63 512 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 SEPT9Q9UHD8 586 aaPredicted RBP22.98■■□□□ 1.27
CASC3-203ENST00000418132 RGS2P41220 211 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 ADCYAP1R1P41586 468 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 UBASH3AP57075 661 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 LAMC2Q13753 1193 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 BMT2Q1RMZ1 405 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 ZCWPW2Q504Y3 356 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 APTXQ7Z2E3 356 aaKnown RBP22.98■■□□□ 1.27
CASC3-203ENST00000418132 CSGALNACT2Q8N6G5 542 aa22.98■■□□□ 1.27
CASC3-203ENST00000418132 EMID1Q96A84 441 aaPredicted RBP22.98■■□□□ 1.27
CASC3-203ENST00000418132 EMSYQ7Z589 1322 aa22.97■■□□□ 1.27
CASC3-203ENST00000418132 CBFA2T2O43439 604 aa22.97■■□□□ 1.27
CASC3-203ENST00000418132 GH1P01241 217 aa22.97■■□□□ 1.27
CASC3-203ENST00000418132 CTGFP29279 349 aa22.97■■□□□ 1.27
CASC3-203ENST00000418132 SPAG1Q07617 926 aa22.97■■□□□ 1.27
CASC3-203ENST00000418132 ODR4Q5SWX8 454 aa22.97■■□□□ 1.27
CASC3-203ENST00000418132 DRC1Q96MC2 740 aa22.97■■□□□ 1.27
CASC3-203ENST00000418132 SRRTQ9BXP5 876 aaKnown RBP22.97■■□□□ 1.27
CASC3-203ENST00000418132 NIFKQ9BYG3 293 aaKnown RBP22.97■■□□□ 1.27
CASC3-203ENST00000418132 KCTD10Q9H3F6 313 aa22.97■■□□□ 1.27
CASC3-203ENST00000418132 AZI2Q9H6S1 392 aa22.97■■□□□ 1.27
CASC3-203ENST00000418132 PDLIM7Q9NR12 457 aa22.97■■□□□ 1.27
CASC3-203ENST00000418132 LARSQ9P2J5 1176 aaKnown RBP22.97■■□□□ 1.27
CASC3-203ENST00000418132 DGAT1O75907 488 aa22.96■■□□□ 1.27
CASC3-203ENST00000418132 MYBP10242 640 aa22.96■■□□□ 1.27
CASC3-203ENST00000418132 FAM178BQ8IXR5 827 aa22.96■■□□□ 1.27
CASC3-203ENST00000418132 ZNF507Q8TCN5 953 aa22.96■■□□□ 1.27
CASC3-203ENST00000418132 NAP1L5Q96NT1 182 aaPredicted RBP22.96■■□□□ 1.27
CASC3-203ENST00000418132 APBA2Q99767 749 aa22.96■■□□□ 1.27
CASC3-203ENST00000418132 FLRT1Q9NZU1 646 aa22.96■■□□□ 1.27
CASC3-203ENST00000418132 LIMA1Q9UHB6 759 aaKnown RBP22.96■■□□□ 1.27
CASC3-203ENST00000418132 LRRC10BA6NIK2 292 aa22.96■■□□□ 1.27
CASC3-203ENST00000418132 EIF3DO15371 548 aaKnown RBP eCLIP22.96■■□□□ 1.27
CASC3-203ENST00000418132 IGHA2P01877 340 aa22.96■■□□□ 1.27
CASC3-203ENST00000418132 OLFML2BQ68BL8 750 aa22.96■■□□□ 1.27
CASC3-203ENST00000418132 IQSEC1Q6DN90 963 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms