RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 GCFC2P16383 781 aaKnown RBP17.62■□□□□ 0.41
ITGB1-204ENST00000417122 CD52P31358 61 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 HTRA4P83105 476 aaPredicted RBP17.62■□□□□ 0.41
ITGB1-204ENST00000417122 NR5A1Q13285 461 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 UGCGQ16739 394 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 EARS2Q5JPH6 523 aaKnown RBP17.62■□□□□ 0.41
ITGB1-204ENST00000417122 B3GNT9Q6UX72 402 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 SPRED2Q7Z698 418 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 KIAA0319LQ8IZA0 1049 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 USP38Q8NB14 1042 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 KIF2CQ99661 725 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 NAP1L4Q99733 375 aaKnown RBP17.62■□□□□ 0.41
ITGB1-204ENST00000417122 NRBP2Q9NSY0 501 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 KDM3AQ9Y4C1 1321 aa17.62■□□□□ 0.41
ITGB1-204ENST00000417122 LINC01553A4QN01 128 aa17.61■□□□□ 0.41
ITGB1-204ENST00000417122 MMP1P03956 469 aa17.61■□□□□ 0.41
ITGB1-204ENST00000417122 FOSBP53539 338 aa17.61■□□□□ 0.41
ITGB1-204ENST00000417122 PRKCEQ02156 737 aa17.61■□□□□ 0.41
ITGB1-204ENST00000417122 TRIM29Q14134 588 aa17.61■□□□□ 0.41
ITGB1-204ENST00000417122 METTL13Q8N6R0 699 aa17.61■□□□□ 0.41
ITGB1-204ENST00000417122 TNFRSF25Q93038 417 aa17.61■□□□□ 0.41
ITGB1-204ENST00000417122 TGS1Q96RS0 853 aaKnown RBP17.61■□□□□ 0.41
ITGB1-204ENST00000417122 KCNMB3Q9NPA1 279 aa17.61■□□□□ 0.41
ITGB1-204ENST00000417122 PADI3Q9ULW8 664 aa17.61■□□□□ 0.41
ITGB1-204ENST00000417122 CHD9Q3L8U1 2897 aa17.61■□□□□ 0.41
ITGB1-204ENST00000417122 FAM205CA6NFA0 338 aa17.6■□□□□ 0.41
ITGB1-204ENST00000417122 ENPP3O14638 875 aa17.6■□□□□ 0.41
ITGB1-204ENST00000417122 MAGEB2O15479 319 aa17.6■□□□□ 0.41
ITGB1-204ENST00000417122 RBM25P49756 843 aaKnown RBP17.6■□□□□ 0.41
ITGB1-204ENST00000417122 PAK2Q13177 524 aa17.6■□□□□ 0.41
ITGB1-204ENST00000417122 CCDC85BQ15834 202 aaPredicted RBP17.6■□□□□ 0.41
ITGB1-204ENST00000417122 KRT40Q6A162 431 aa17.6■□□□□ 0.41
ITGB1-204ENST00000417122 CCDC83Q8IWF9 413 aa17.6■□□□□ 0.41
ITGB1-204ENST00000417122 SP7Q8TDD2 431 aaPredicted RBP17.6■□□□□ 0.41
ITGB1-204ENST00000417122 ZSCAN31Q96LW9 406 aaPredicted RBP17.6■□□□□ 0.41
ITGB1-204ENST00000417122 FAM20AQ96MK3 541 aa17.6■□□□□ 0.41
ITGB1-204ENST00000417122 YME1L1Q96TA2 773 aa17.6■□□□□ 0.41
ITGB1-204ENST00000417122 FTHL17Q9BXU8 183 aa17.6■□□□□ 0.41
ITGB1-204ENST00000417122 MTUS1Q9ULD2 1270 aa17.6■□□□□ 0.41
ITGB1-204ENST00000417122 GINS2Q9Y248 185 aa17.6■□□□□ 0.41
ITGB1-204ENST00000417122 COL4A4P53420 1690 aaPredicted RBP17.6■□□□□ 0.41
ITGB1-204ENST00000417122 BTBD18B2RXH4 712 aa17.59■□□□□ 0.41
ITGB1-204ENST00000417122 TBX3O15119 743 aa17.59■□□□□ 0.41
ITGB1-204ENST00000417122 GTPBP6O43824 516 aaPredicted RBP17.59■□□□□ 0.41
ITGB1-204ENST00000417122 ERVK-21P61565 698 aa17.59■□□□□ 0.41
ITGB1-204ENST00000417122 DIS3L2Q8IYB7 885 aaKnown RBP17.59■□□□□ 0.41
ITGB1-204ENST00000417122 MICALL1Q8N3F8 863 aa17.59■□□□□ 0.41
ITGB1-204ENST00000417122 CDHR5Q9HBB8 845 aa17.59■□□□□ 0.41
ITGB1-204ENST00000417122 EYSQ5T1H1 3165 aa17.59■□□□□ 0.41
ITGB1-204ENST00000417122 MARCH6O60337 910 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 VTNP04004 478 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 POU3F3P20264 500 aaPredicted RBP17.58■□□□□ 0.4
ITGB1-204ENST00000417122 TMOD1P28289 359 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 CLCN3P51790 818 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 GRB10Q13322 594 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 PPP2R5CQ13362 524 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 TMEM266Q2M3C6 531 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 EFCAB12Q6NXP0 572 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 POTEDQ86YR6 584 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 BANK1Q8NDB2 785 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 LINC01599Q8WXQ3 324 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 HAS1Q92839 578 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 PPP1R16BQ96T49 567 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 LLPHQ9BRT6 129 aaKnown RBP17.58■□□□□ 0.4
ITGB1-204ENST00000417122 SH2B1Q9NRF2 756 aaPredicted RBP17.58■□□□□ 0.4
ITGB1-204ENST00000417122 VAV3Q9UKW4 847 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 MTCH2Q9Y6C9 303 aa17.58■□□□□ 0.4
ITGB1-204ENST00000417122 EML1O00423 815 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 LPXNO60711 386 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 GPR32O75388 356 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 RPS6KA5O75582 802 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 CRYBB1P53674 252 aaPredicted RBP17.57■□□□□ 0.4
ITGB1-204ENST00000417122 TBC1D8BQ0IIM8 1120 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 NFX1Q12986 1120 aaKnown RBP17.57■□□□□ 0.4
ITGB1-204ENST00000417122 KIZQ2M2Z5 673 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 XKR3Q5GH77 459 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 RTN4RL1Q86UN2 441 aaPredicted RBP17.57■□□□□ 0.4
ITGB1-204ENST00000417122 LRRC71Q8N4P6 559 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 LINC01465Q8N7H1 131 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 GDPD5Q8WTR4 605 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 TMEM40Q8WWA1 233 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 MAP7D2Q96T17 732 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 OSMRQ99650 979 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 C17orf80Q9BSJ5 609 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 NIFKQ9BYG3 293 aaKnown RBP17.57■□□□□ 0.4
ITGB1-204ENST00000417122 SUGCTQ9HAC7 445 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 SEPT9Q9UHD8 586 aaPredicted RBP17.57■□□□□ 0.4
ITGB1-204ENST00000417122 AKT3Q9Y243 479 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 NOC2LQ9Y3T9 749 aaKnown RBP17.57■□□□□ 0.4
ITGB1-204ENST00000417122 COL4A6Q14031 1691 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 CHD7Q9P2D1 2997 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 TTC3P53804 2025 aa17.57■□□□□ 0.4
ITGB1-204ENST00000417122 NLRC5Q86WI3 1866 aa17.56■□□□□ 0.4
ITGB1-204ENST00000417122 STBD1O95210 358 aa17.56■□□□□ 0.4
ITGB1-204ENST00000417122 BAG4O95429 457 aaKnown RBP17.56■□□□□ 0.4
ITGB1-204ENST00000417122 PSMC5P62195 406 aa17.56■□□□□ 0.4
ITGB1-204ENST00000417122 SAFBQ15424 915 aaKnown RBP eCLIP17.56■□□□□ 0.4
ITGB1-204ENST00000417122 TARBP2Q15633 366 aaKnown RBP17.56■□□□□ 0.4
ITGB1-204ENST00000417122 MTERF2Q49AM1 385 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms