RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 MYBL2P10244 700 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 MTHFD1P11586 935 aaKnown RBP4.09□□□□□ -1.75
SF3B1-203ENST00000414174 P4HA1P13674 534 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 GSTT1P30711 240 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 CD86P42081 329 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 CTCFP49711 727 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-203ENST00000414174 GTF2A2P52657 109 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 LIMK1P53667 647 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 ERVK-24P63145 666 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 TMF1P82094 1093 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 DEUP1Q05D60 604 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 SQSTM1Q13501 440 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 MLECQ14165 292 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 RABEP1Q15276 862 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 SYCP1Q15431 976 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 SLC14A2Q15849 920 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 CCDC152Q4G0S7 254 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 TNNI3KQ59H18 835 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 TMEM67Q5HYA8 995 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 PPM1JQ5JR12 505 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 SPATA1Q5VX52 437 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 TATDN1Q6P1N9 297 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 MPZL3Q6UWV2 235 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 CEP68Q76N32 757 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 BTN2A1Q7KYR7 527 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 SAPCD2Q86UD0 394 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 DZIP1Q86YF9 867 aaKnown RBP4.09□□□□□ -1.75
SF3B1-203ENST00000414174 THNSL2Q86YJ6 484 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 SLC44A2Q8IWA5 706 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-203ENST00000414174 EFCAB13Q8IY85 973 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 CEP57L1Q8IYX8 460 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 KRT222Q8N1A0 295 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 DCLK2Q8N568 766 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 TOP6BLQ8N6T0 577 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-203ENST00000414174 RNF214Q8ND24 703 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 FAM76AQ8TAV0 307 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 CHAC2Q8WUX2 184 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 ASB11Q8WXH4 323 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 TNPO1Q92973 898 aaKnown RBP4.09□□□□□ -1.75
SF3B1-203ENST00000414174 GJA10Q969M2 543 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 GAL3ST3Q96A11 431 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 BICD1Q96G01 975 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 C8orf76Q96K31 380 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 HEXIM2Q96MH2 286 aaKnown RBP4.09□□□□□ -1.75
SF3B1-203ENST00000414174 TIGD1Q96MW7 591 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 SH3GL1Q99961 368 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 CAPS2Q9BXY5 557 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 SEMA4AQ9H3S1 761 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 PARD6AQ9NPB6 346 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 NLRC4Q9NPP4 1024 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 RRAGDQ9NQL2 400 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-203ENST00000414174 STARD7Q9NQZ5 370 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 ANKEF1Q9NU02 776 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 TBC1D22BQ9NU19 505 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 TCP11L1Q9NUJ3 509 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 OBP2AQ9NY56 170 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 IL20Q9NYY1 176 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 PDP2Q9P2J9 529 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 PPM1HQ9ULR3 514 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 PLAAQ9Y263 795 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 CSADQ9Y600 493 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 TACC3Q9Y6A5 838 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 EPN1Q9Y6I3 576 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-203ENST00000414174 USP31Q70CQ4 1352 aa4.09□□□□□ -1.75
SF3B1-203ENST00000414174 KIF2AO00139 706 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-203ENST00000414174 RTCAO00442 366 aaKnown RBP4.08□□□□□ -1.76
SF3B1-203ENST00000414174 PRPF3O43395 683 aaKnown RBP4.08□□□□□ -1.76
SF3B1-203ENST00000414174 RNGTTO60942 597 aaKnown RBP4.08□□□□□ -1.76
SF3B1-203ENST00000414174 RFPL1O75677 317 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 STAM2O75886 525 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 SASH1O94885 1247 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 SMC2O95347 1197 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 BAG4O95429 457 aaKnown RBP4.08□□□□□ -1.76
SF3B1-203ENST00000414174 FGFR1OPO95684 399 aaKnown RBP4.08□□□□□ -1.76
SF3B1-203ENST00000414174 CAPNS1P04632 268 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 CEACAM5P06731 702 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 ATP6V1B1P15313 513 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 PHKG2P15735 406 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 FERP16591 822 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 STAT3P40763 770 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 SKIV2L2P42285 1042 aaKnown RBP4.08□□□□□ -1.76
SF3B1-203ENST00000414174 KCNJ4P48050 445 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 TM4SF4P48230 202 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 CDK8P49336 464 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 PDE6CP51160 858 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 RWDD2BP57060 319 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 CCDC173Q0VFZ6 552 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 INPP5AQ14642 412 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 PLCB4Q15147 1175 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 SLC5A9Q2M3M2 681 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 BOLA3Q53S33 107 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 HECTD3Q5T447 861 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 ZBTB37Q5TC79 503 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 PCNX4Q63HM2 1172 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 ALG1LQ6GMV1 187 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 FAM180BQ6P0A1 224 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 CRTC1Q6UUV9 634 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 BTNL9Q6UXG8 535 aa4.08□□□□□ -1.76
SF3B1-203ENST00000414174 ARHGEF18Q6ZSZ5 1173 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms