RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 GPR75-ASB3A0A0A6YYF3 556 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 CCL15-CCL14A0A0B4J2E2 113 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 TEX51A0A1B0GUA7 166 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 MCAMP43121 646 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 BTDP43251 543 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 GTF2A2P52657 109 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 GSTO1P78417 241 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 CRHR2Q13324 411 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 PPIL2Q13356 520 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 NR0B2Q15466 257 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 PKN2Q16513 984 aaKnown RBP6.37□□□□□ -1.39
LINC00342-201ENST00000412393 CCL15Q16663 113 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 L1TD1Q5T7N2 865 aaKnown RBP6.37□□□□□ -1.39
LINC00342-201ENST00000412393 CEP85Q6P2H3 762 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 ZSCAN29Q8IWY8 852 aaPredicted RBP6.37□□□□□ -1.39
LINC00342-201ENST00000412393 ZFPM1Q8IX07 1006 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.37□□□□□ -1.39
LINC00342-201ENST00000412393 EPS8L3Q8TE67 593 aaKnown RBP6.37□□□□□ -1.39
LINC00342-201ENST00000412393 BRI3BPQ8WY22 251 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 ELMO3Q96BJ8 720 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 NSUN4Q96CB9 384 aaKnown RBP6.37□□□□□ -1.39
LINC00342-201ENST00000412393 MIPEPQ99797 713 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 PTPN18Q99952 460 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 IDI2Q9BXS1 227 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 RAI14Q9P0K7 980 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 ZSWIM5Q9P217 1185 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 LRP2BPQ9P2M1 347 aa6.37□□□□□ -1.39
LINC00342-201ENST00000412393 MGAMO43451 1857 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 RFX7Q2KHR2 1363 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 H3BRB1 525 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 WDHD1O75717 1129 aaPredicted RBP6.36□□□□□ -1.39
LINC00342-201ENST00000412393 MAP4K4O95819 1239 aaPredicted RBP6.36□□□□□ -1.39
LINC00342-201ENST00000412393 IGHA2P01877 340 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 ESR1P03372 595 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 CETPP11597 493 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 RHBDL3P58872 404 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 PPATQ06203 517 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 SNAPC2Q13487 334 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 PICALMQ13492 652 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 TAF1CQ15572 869 aaPredicted RBP6.36□□□□□ -1.39
LINC00342-201ENST00000412393 RALGPS1Q5JS13 557 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 LLGL2Q6P1M3 1020 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 LETMD1Q6P1Q0 360 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 FBXO46Q6PJ61 603 aaPredicted RBP6.36□□□□□ -1.39
LINC00342-201ENST00000412393 ERC1Q8IUD2 1116 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 ZNF384Q8TF68 577 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 ERO1AQ96HE7 468 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 ZNF512BQ96KM6 892 aaPredicted RBP6.36□□□□□ -1.39
LINC00342-201ENST00000412393 NOL10Q9BSC4 688 aaKnown RBP6.36□□□□□ -1.39
LINC00342-201ENST00000412393 BCO2Q9BYV7 579 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 NIF3L1Q9GZT8 377 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 CCDC8Q9H0W5 538 aaPredicted RBP6.36□□□□□ -1.39
LINC00342-201ENST00000412393 TUT1Q9H6E5 874 aaKnown RBP6.36□□□□□ -1.39
LINC00342-201ENST00000412393 DDX4Q9NQI0 724 aaKnown RBP6.36□□□□□ -1.39
LINC00342-201ENST00000412393 ZNF112Q9UJU3 913 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 DBNLQ9UJU6 430 aaKnown RBP6.36□□□□□ -1.39
LINC00342-201ENST00000412393 PPM1HQ9ULR3 514 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 DDX19BQ9UMR2 479 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 PCDHA4Q9UN74 947 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 CYP8B1Q9UNU6 501 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 EXOC6BQ9Y2D4 811 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 MYH7P12883 1935 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 ZSWIM8A7E2V4 1837 aa6.36□□□□□ -1.39
LINC00342-201ENST00000412393 ATRNL1Q5VV63 1379 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 SIPA1L1O43166 1804 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 FSD2A1L4K1 749 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 FITM1A5D6W6 292 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 DDTLA6NHG4 134 aaPredicted RBP6.35□□□□□ -1.39
LINC00342-201ENST00000412393 GPR182O15218 404 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 HMMRO75330 724 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 ADRB1P08588 477 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 BMP6P22004 513 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 RGS19P49795 217 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 HK2P52789 917 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 SP3Q02447 781 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 SLBPQ14493 270 aaKnown RBP eCLIP6.35□□□□□ -1.39
LINC00342-201ENST00000412393 SNX17Q15036 470 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 HSP90AB4PQ58FF6 505 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 NOL9Q5SY16 702 aaKnown RBP6.35□□□□□ -1.39
LINC00342-201ENST00000412393 NAA16Q6N069 864 aaPredicted RBP6.35□□□□□ -1.39
LINC00342-201ENST00000412393 PRRT2Q7Z6L0 340 aaPredicted RBP6.35□□□□□ -1.39
LINC00342-201ENST00000412393 AACSQ86V21 672 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 RPAP2Q8IXW5 612 aaPredicted RBP6.35□□□□□ -1.39
LINC00342-201ENST00000412393 TEX11Q8IYF3 940 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 CD99L2Q8TCZ2 262 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 EAF2Q96CJ1 260 aaPredicted RBP6.35□□□□□ -1.39
LINC00342-201ENST00000412393 RNF32Q9H0A6 362 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 TRIT1Q9H3H1 467 aaKnown RBP6.35□□□□□ -1.39
LINC00342-201ENST00000412393 CHMP4BQ9H444 224 aaKnown RBP6.35□□□□□ -1.39
LINC00342-201ENST00000412393 ZCCHC17Q9NP64 241 aaKnown RBP6.35□□□□□ -1.39
LINC00342-201ENST00000412393 ZBTB40Q9NUA8 1239 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 TRIM17Q9Y577 477 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 DOCK3Q8IZD9 2030 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 MYH8P13535 1937 aa6.35□□□□□ -1.39
LINC00342-201ENST00000412393 COL2A1P02458 1487 aaPredicted RBP6.34□□□□□ -1.39
LINC00342-201ENST00000412393 BTBD19C9JJ37 291 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 BAG3O95817 575 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 CELA3BP08861 270 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 SOX10P56693 466 aa6.34□□□□□ -1.39
LINC00342-201ENST00000412393 ARHGEF6Q15052 776 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms