RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 BYSLQ13895 437 aaKnown RBP13.89□□□□□ -0.19
RNF43-201ENST00000407977 NBPF20Q3BBV1 942 aa13.89□□□□□ -0.19
RNF43-201ENST00000407977 EPN3Q9H201 632 aa13.89□□□□□ -0.19
RNF43-201ENST00000407977 IGBP1P78318 339 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 SLFN12LQ6IEE8 588 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 ING2Q9H160 280 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 ZCCHC17Q9NP64 241 aaKnown RBP13.88□□□□□ -0.19
RNF43-201ENST00000407977 PPME1Q9Y570 386 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 GJA3Q9Y6H8 435 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 PDHA1P08559 390 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 LRIG3Q6UXM1 1119 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 RPS6KC1Q96S38 1066 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
RNF43-201ENST00000407977 LRRC53A6NM62 1247 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 PIGSQ96S52 555 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 WARS2Q9UGM6 360 aaKnown RBP13.88□□□□□ -0.19
RNF43-201ENST00000407977 DNAJC12Q9UKB3 198 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 ZBBXA8MT70 800 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 F8W8V4 182 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 TOB2Q14106 344 aaPredicted RBP13.88□□□□□ -0.19
RNF43-201ENST00000407977 NIM1KQ8IY84 436 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 PUS3Q9BZE2 481 aaKnown RBP13.88□□□□□ -0.19
RNF43-201ENST00000407977 SLC12A6Q9UHW9 1150 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 GDAQ9Y2T3 454 aa13.88□□□□□ -0.19
RNF43-201ENST00000407977 PAMP19021 973 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 MIS18BP1Q6P0N0 1132 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 FAF2Q96CS3 445 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 ARHGEF37A1IGU5 675 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 ARHGEF9O43307 516 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 CDC25AP30304 524 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 RARS2Q5T160 578 aaKnown RBP13.87□□□□□ -0.19
RNF43-201ENST00000407977 TEX9Q8N6V9 391 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 SCG3Q8WXD2 468 aaKnown RBP13.87□□□□□ -0.19
RNF43-201ENST00000407977 SNX25Q9H3E2 840 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 DONSONQ9NYP3 566 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 ARL2BPQ9Y2Y0 163 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 WDR17Q8IZU2 1322 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 IGSF1Q8N6C5 1336 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 MLH3Q9UHC1 1453 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 LDHAP00338 332 aaKnown RBP13.87□□□□□ -0.19
RNF43-201ENST00000407977 DDIT3P35638 169 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 ERICH1Q86X53 443 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 SKA2Q8WVK7 121 aaPredicted RBP13.87□□□□□ -0.19
RNF43-201ENST00000407977 BTBD6Q96KE9 485 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 PUS7LQ9H0K6 701 aaKnown RBP13.87□□□□□ -0.19
RNF43-201ENST00000407977 KIAA1586Q9HCI6 787 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 CYP26B1Q9NR63 512 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 MDH1P40925 334 aaKnown RBP13.87□□□□□ -0.19
RNF43-201ENST00000407977 NEK2P51955 445 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 BIRC2Q13490 618 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 MORF4L2Q15014 288 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 TBC1D9BQ66K14 1250 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 MYLK4Q86YV6 388 aaPredicted RBP13.87□□□□□ -0.19
RNF43-201ENST00000407977 PCIF1Q9H4Z3 704 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 KAT6BQ8WYB5 2073 aa13.87□□□□□ -0.19
RNF43-201ENST00000407977 AGTP01019 485 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 SERPINB2P05120 415 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 ZFXP17010 805 aaPredicted RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 ANXA13P27216 316 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 PPARGP37231 505 aaPredicted RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 CACNB1Q02641 598 aaPredicted RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 AP3B2Q13367 1082 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 CCDC92Q53HC0 331 aaPredicted RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 OR6B2Q6IFH4 312 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 LCA5Q86VQ0 697 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 ANKRD7Q92527 254 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 ANO3Q9BYT9 981 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 WNT8AQ9H1J5 351 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 CNOT8Q9UFF9 292 aaKnown RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 SYNJ2BP-COX16A0A087WUM0 186 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 SYCE1LA8MT33 242 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 ZNF189O75820 626 aaPredicted RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 HSPA9P38646 679 aaKnown RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 DHX40Q8IX18 779 aaKnown RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 SPATA4Q8NEY3 305 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 GCOM2Q9BZD3 368 aaPredicted RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 COX16Q9P0S2 106 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 ANAPC7Q9UJX3 599 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 ARHGAP26Q9UNA1 814 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 L3MBTL1Q9Y468 752 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 ABCA5Q8WWZ7 1642 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 PNMA6FA0A0J9YX94 578 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 STXBP3O00186 592 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 PTPN12Q05209 780 aaKnown RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 RGS9BPQ6ZS82 235 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 AGGF1Q8N302 714 aaeCLIP13.86□□□□□ -0.19
RNF43-201ENST00000407977 SUCLA2Q9P2R7 463 aaPredicted RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 XDHP47989 1333 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 TYW5A2RUC4 315 aaKnown RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 WDR64B1ANS9 1081 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 EIF3HO15372 352 aaKnown RBP eCLIP13.86□□□□□ -0.192e-7■■□□□ 12.4
RNF43-201ENST00000407977 KCNA4P22459 653 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 PAPOLAP51003 745 aaKnown RBP13.86□□□□□ -0.19
RNF43-201ENST00000407977 STAT4Q14765 748 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 FAM83BQ5T0W9 1011 aa13.86□□□□□ -0.19
RNF43-201ENST00000407977 HIPK4Q8NE63 616 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms