RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 EPOPA6NHQ4 379 aa16.78■□□□□ 0.28
SMIM11A-203ENST00000399299 ZNF862O60290 1169 aa16.78■□□□□ 0.28
SMIM11A-203ENST00000399299 OATP04181 439 aa16.78■□□□□ 0.28
SMIM11A-203ENST00000399299 FAM117BQ6P1L5 589 aa16.78■□□□□ 0.28
SMIM11A-203ENST00000399299 KIAA0319LQ8IZA0 1049 aa16.78■□□□□ 0.28
SMIM11A-203ENST00000399299 TGS1Q96RS0 853 aaKnown RBP16.78■□□□□ 0.28
SMIM11A-203ENST00000399299 FTHL17Q9BXU8 183 aa16.78■□□□□ 0.28
SMIM11A-203ENST00000399299 AGO3Q9H9G7 860 aaKnown RBP16.78■□□□□ 0.28
SMIM11A-203ENST00000399299 CERS4Q9HA82 394 aa16.78■□□□□ 0.28
SMIM11A-203ENST00000399299 BRMS1Q9HCU9 246 aa16.78■□□□□ 0.28
SMIM11A-203ENST00000399299 RALGAPA2Q2PPJ7 1873 aa16.78■□□□□ 0.28
SMIM11A-203ENST00000399299 MAGEB2O15479 319 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 CHMP2AO43633 222 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 GTPBP6O43824 516 aaPredicted RBP16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 SLC37A4O43826 429 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 CD52P31358 61 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 KRT2P35908 639 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 PRKCEQ02156 737 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 TMEM62Q0P6H9 643 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 LETM2Q2VYF4 491 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 PIK3AP1Q6ZUJ8 805 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 MIER3Q7Z3K6 550 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 SPRED2Q7Z698 418 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 OXER1Q8TDS5 423 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 FAM20AQ96MK3 541 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 KCNMB3Q9NPA1 279 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 NRBP2Q9NSY0 501 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 LIMCH1Q9UPQ0 1083 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 MTCH2Q9Y6C9 303 aa16.77■□□□□ 0.28
SMIM11A-203ENST00000399299 NLRC5Q86WI3 1866 aa16.77■□□□□ 0.27
SMIM11A-203ENST00000399299 RFXAPO00287 272 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 TBX3O15119 743 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 LPXNO60711 386 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 DTNBO60941 627 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 PAK2Q13177 524 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 UGCGQ16739 394 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 ZNF710Q8N1W2 664 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 TNFRSF25Q93038 417 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 GJA10Q969M2 543 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 SAMD11Q96NU1 681 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 YME1L1Q96TA2 773 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 LMCD1Q9NZU5 365 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 PADI3Q9ULW8 664 aa16.76■□□□□ 0.27
SMIM11A-203ENST00000399299 ENPP3O14638 875 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 CCNT1O60563 726 aaKnown RBP16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 JAK2O60674 1132 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 UPP2O95045 317 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 MMP1P03956 469 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 ST3GAL1Q11201 340 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 NR5A1Q13285 461 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 GRB10Q13322 594 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 PPP2R5CQ13362 524 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 ODR4Q5SWX8 454 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 LINC01465Q8N7H1 131 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 LINC01599Q8WXQ3 324 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 KIF2CQ99661 725 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 RC3H2Q9HBD1 1191 aaKnown RBP16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 TTC28Q96AY4 2481 aa16.75■□□□□ 0.27
SMIM11A-203ENST00000399299 TMOD1P28289 359 aa16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 RBM25P49756 843 aaKnown RBP16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 CRYBB1P53674 252 aaPredicted RBP16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 TRIM29Q14134 588 aa16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 TARBP2Q15633 366 aaKnown RBP16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 XKR3Q5GH77 459 aa16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 EARS2Q5JPH6 523 aaKnown RBP16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 TRMT1LQ7Z2T5 733 aaKnown RBP16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 METTL13Q8N6R0 699 aa16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 PPM1EQ8WY54 764 aa16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 ZSCAN31Q96LW9 406 aaPredicted RBP16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 TSPYL2Q9H2G4 693 aaPredicted RBP16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 SUGCTQ9HAC7 445 aa16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 THEGQ9P2T0 379 aa16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 VAV3Q9UKW4 847 aa16.74■□□□□ 0.27
SMIM11A-203ENST00000399299 VCANP13611 3396 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 DLL1O00548 723 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 GPR32O75388 356 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 RPS6KA5O75582 802 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 CCDC85BQ15834 202 aaPredicted RBP16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 KRT40Q6A162 431 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 EFCAB12Q6NXP0 572 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 DIS3L2Q8IYB7 885 aaKnown RBP16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 CRIPAKQ8N1N5 446 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 MAP7D2Q96T17 732 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 C17orf80Q9BSJ5 609 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 NIFKQ9BYG3 293 aaKnown RBP16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 CDHR5Q9HBB8 845 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 ERVK-5Q9HDB9 667 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 MTUS1Q9ULD2 1270 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 GINS2Q9Y248 185 aa16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 NOC2LQ9Y3T9 749 aaKnown RBP16.73■□□□□ 0.27
SMIM11A-203ENST00000399299 ADGRA3Q8IWK6 1321 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 FAM205CA6NFA0 338 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 DKC1O60832 514 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 STBD1O95210 358 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 VTNP04004 478 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 CLCN3P51790 818 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 PSMC5P62195 406 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 TBC1D8BQ0IIM8 1120 aa16.72■□□□□ 0.27
SMIM11A-203ENST00000399299 KIZQ2M2Z5 673 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms