RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SF3A3Q12874 501 aaKnown RBP eCLIP15.21■□□□□ 0.031e-6■■□□□ 11.9
NUP98-204ENST00000397004 SLC30A5Q8TAD4 765 aa15.21■□□□□ 0.03
NUP98-204ENST00000397004 CABS1Q96KC9 395 aa15.21■□□□□ 0.03
NUP98-204ENST00000397004 DPH5Q9H2P9 285 aa15.21■□□□□ 0.03
NUP98-204ENST00000397004 ADAM7Q9H2U9 754 aa15.21■□□□□ 0.03
NUP98-204ENST00000397004 POLLQ9UGP5 575 aa15.21■□□□□ 0.03
NUP98-204ENST00000397004 TRAF3IP3Q9Y228 551 aa15.21■□□□□ 0.03
NUP98-204ENST00000397004 DAGLAQ9Y4D2 1042 aa15.21■□□□□ 0.03
NUP98-204ENST00000397004 GMNCA6NCL1 334 aa15.21■□□□□ 0.02
NUP98-204ENST00000397004 RPS6KA4O75676 772 aa15.21■□□□□ 0.02
NUP98-204ENST00000397004 PRKCIP41743 596 aa15.21■□□□□ 0.02
NUP98-204ENST00000397004 SNAP25P60880 206 aa15.21■□□□□ 0.02
NUP98-204ENST00000397004 MAGOHP61326 146 aaKnown RBP15.21■□□□□ 0.02
NUP98-204ENST00000397004 PABPC4Q13310 644 aaKnown RBP eCLIP15.21■□□□□ 0.02
NUP98-204ENST00000397004 MFSD14BQ5SR56 506 aa15.21■□□□□ 0.02
NUP98-204ENST00000397004 ADAT2Q7Z6V5 191 aaKnown RBP15.21■□□□□ 0.02
NUP98-204ENST00000397004 MAGOHBQ96A72 148 aaKnown RBP15.21■□□□□ 0.02
NUP98-204ENST00000397004 GJD4Q96KN9 370 aaPredicted RBP15.21■□□□□ 0.02
NUP98-204ENST00000397004 RAB34Q9BZG1 259 aa15.21■□□□□ 0.02
NUP98-204ENST00000397004 SLC40A1Q9NP59 571 aa15.21■□□□□ 0.02
NUP98-204ENST00000397004 TAS2R14Q9NYV8 317 aa15.21■□□□□ 0.02
NUP98-204ENST00000397004 BCCIPQ9P287 314 aaKnown RBP eCLIP15.21■□□□□ 0.02
NUP98-204ENST00000397004 F8VZ95 297 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 GCOM1H8Y6P7 765 aaPredicted RBP15.2■□□□□ 0.02
NUP98-204ENST00000397004 KRIT1O00522 736 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 OPLAHO14841 1288 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 LRRN2O75325 713 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 MYZAPP0CAP1 466 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 IL1R1P14778 569 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 DDR1Q08345 913 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 EDRF1Q3B7T1 1238 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 KSR1Q8IVT5 923 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 SFI1A8K8P3 1242 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 CLIC2O15247 247 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 DDX3YO15523 660 aaKnown RBP15.2■□□□□ 0.02
NUP98-204ENST00000397004 ASPRV1Q53RT3 343 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 CYP2W1Q8TAV3 490 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 ETNPPLQ8TBG4 499 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 UBLCP1Q8WVY7 318 aaPredicted RBP15.2■□□□□ 0.02
NUP98-204ENST00000397004 SYT11Q9BT88 431 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 TRIM31Q9BZY9 425 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 PSTPIP2Q9H939 334 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 A6NNZ2 444 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 PGRMC1O00264 195 aaKnown RBP15.2■□□□□ 0.02
NUP98-204ENST00000397004 MEIS2O14770 477 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 BUB1BO60566 1050 aaPredicted RBP15.2■□□□□ 0.02
NUP98-204ENST00000397004 SHMT1P34896 483 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 SEPT2Q15019 361 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 TUBB8Q3ZCM7 444 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 GLG1Q92896 1179 aa15.2■□□□□ 0.02
NUP98-204ENST00000397004 ZBTB39O15060 712 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 TGFB1I1O43294 461 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 GNA14O95837 355 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 CUL1Q13616 776 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 EXOC3L4Q17RC7 722 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 DCAF17Q5H9S7 520 aaPredicted RBP15.19■□□□□ 0.02
NUP98-204ENST00000397004 ZFPM1Q8IX07 1006 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 CCDC65Q8IXS2 484 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 EIF1ADQ8N9N8 165 aaKnown RBP15.19■□□□□ 0.02
NUP98-204ENST00000397004 ARHGEF26Q96DR7 871 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 FAM163AQ96GL9 167 aaPredicted RBP15.19■□□□□ 0.02
NUP98-204ENST00000397004 SEC16BQ96JE7 1060 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 ZDHHC18Q9NUE0 388 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 COG5Q9UP83 839 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 ZMYM2Q9UBW7 1377 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 C5orf60A6NFR6 353 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 CAND2O75155 1236 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 GALCP54803 685 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 KNOP1Q1ED39 458 aaKnown RBP15.19■□□□□ 0.02
NUP98-204ENST00000397004 GPATCH11Q8N954 259 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 PBKQ96KB5 322 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 RUSC1Q9BVN2 902 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 KLC4Q9NSK0 619 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 AFF2P51816 1311 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 FAM86B1E9PN63 330 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 hCG_1984214I3L0E3 225 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 FAM86B2P0C5J1 330 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 SMTNP53814 917 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 COG2Q14746 738 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 ZNF804AQ7Z570 1209 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 ZNF713Q8N859 430 aaPredicted RBP15.19■□□□□ 0.02
NUP98-204ENST00000397004 ALG3Q92685 438 aa15.19■□□□□ 0.02
NUP98-204ENST00000397004 TMCO5BA8MYB1 307 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 GFPT2O94808 682 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 AFPP02771 609 aaKnown RBP15.18■□□□□ 0.02
NUP98-204ENST00000397004 LDHCP07864 332 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 ANKRD20A8PQ5CZ79 823 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 C15orf52Q6ZUT6 534 aaKnown RBP15.18■□□□□ 0.02
NUP98-204ENST00000397004 GLYCTKQ8IVS8 523 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 CERS5Q8N5B7 392 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 CUL5Q93034 780 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 CALR3Q96L12 384 aaKnown RBP15.18■□□□□ 0.02
NUP98-204ENST00000397004 DNAJC18Q9H819 358 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 ZNF287Q9HBT7 754 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 ARMCX3Q9UH62 379 aaPredicted RBP15.18■□□□□ 0.02
NUP98-204ENST00000397004 BCS1LQ9Y276 419 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 ZBTB5O15062 677 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 CETN3O15182 167 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 KIAA0754O94854 1291 aa15.18■□□□□ 0.02
NUP98-204ENST00000397004 UFL1O94874 794 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms