RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 RPS6KA1Q15418 735 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 SWT1Q5T5J6 900 aaKnown RBP15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 NIM1KQ8IY84 436 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 IQCKQ8N0W5 287 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 SCFD1Q8WVM8 642 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 ZNRF3Q9ULT6 936 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 PCDHGC5Q9Y5F6 944 aa15.35■□□□□ 0.05
CCHCR1-203ENST00000396268 GRID2IPA4D2P6 1211 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 USP17L15C9J2P7 530 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 USP17L13C9JLJ4 530 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 USP17L11C9JVI0 530 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 USP17L18D6R9N7 530 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 USP17L22D6RA61 530 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 USP17L17D6RBQ6 530 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 USP17L19D6RCP7 530 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 USP17L20D6RJB6 530 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 CETN3O15182 167 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 STAT3P40763 770 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 USP17L24Q0WX57 530 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 SEPT2Q15019 361 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 USP17L6PQ6QN14 398 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 CABS1Q96KC9 395 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 IDI2Q9BXS1 227 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 SUFUQ9UMX1 484 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 SPDYE2BA6NHP3 402 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 USP17L10C9JJH3 530 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 E7EVH7 732 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 CEP104O60308 925 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 HLA-DOAP06340 250 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 SPDYE6P0CI01 402 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 SCP2P22307 547 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 SKOR1P84550 965 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 PTK2Q05397 1052 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 CEP85LQ5SZL2 805 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 INPP4AQ96PE3 977 aaPredicted RBP15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 KDM3AQ9Y4C1 1321 aa15.34■□□□□ 0.05
CCHCR1-203ENST00000396268 IGKV6D-41A0A0C4DH26 115 aa15.33■□□□□ 0.05
CCHCR1-203ENST00000396268 TMCO5BA8MYB1 307 aa15.33■□□□□ 0.05
CCHCR1-203ENST00000396268 SLC9A1P19634 815 aa15.33■□□□□ 0.05
CCHCR1-203ENST00000396268 NR1D1P20393 614 aa15.33■□□□□ 0.05
CCHCR1-203ENST00000396268 CDC37Q16543 378 aaPredicted RBP15.33■□□□□ 0.05
CCHCR1-203ENST00000396268 TCERG1LQ5VWI1 586 aa15.33■□□□□ 0.05
CCHCR1-203ENST00000396268 USP38Q8NB14 1042 aa15.33■□□□□ 0.05
CCHCR1-203ENST00000396268 OR2W6PQ8NHA6 318 aa15.33■□□□□ 0.05
CCHCR1-203ENST00000396268 MRIQ9BWK5 157 aa15.33■□□□□ 0.05
CCHCR1-203ENST00000396268 TAOK3Q9H2K8 898 aa15.33■□□□□ 0.05
CCHCR1-203ENST00000396268 VEZTQ9HBM0 779 aa15.33■□□□□ 0.05
CCHCR1-203ENST00000396268 TTLL1O95922 423 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 LSP1P33241 339 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 ZNF543Q08ER8 600 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 NBPF9Q3BBW0 867 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 DCAF17Q5H9S7 520 aaPredicted RBP15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 RBM26Q5T8P6 1007 aaKnown RBP15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 ARHGAP27Q6ZUM4 889 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 BANK1Q8NDB2 785 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 POTEFA5A3E0 1075 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 GOLGA6L10A6NI86 522 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 MEFVO15553 781 aaPredicted RBP15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 POTEIP0CG38 1075 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 RDXP35241 583 aaKnown RBP15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 E2F5Q15329 346 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 NAA35Q5VZE5 725 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 POTEGQ6S5H5 508 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 POTEEQ6S8J3 1075 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 GIMAP7Q8NHV1 300 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 AP1M1Q9BXS5 423 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 AIPL1Q9NZN9 384 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 HDAC9Q9UKV0 1011 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 PLAAQ9Y263 795 aa15.33■□□□□ 0.04
CCHCR1-203ENST00000396268 A6NNZ2 444 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 CYP11B2P19099 503 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 USP8P40818 1118 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 TUBB8Q3ZCM7 444 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 WHAMMQ8TF30 809 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 KCTD10Q9H3F6 313 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 BRCA1P38398 1863 aaKnown RBP15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 MEIS1O00470 390 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 ZNF571Q7Z3V5 609 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 DDX42Q86XP3 938 aaKnown RBP eCLIP15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 CNPY4Q8N129 248 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 PIK3R5Q8WYR1 880 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 SCLT1Q96NL6 688 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 CSRNP1Q96S65 589 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 TMEM39BQ9GZU3 492 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 GANQ9H2C0 597 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 PCDHA2Q9Y5H9 948 aa15.32■□□□□ 0.04
CCHCR1-203ENST00000396268 CCDC172P0C7W6 258 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 HOXA7P31268 230 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 NOVP48745 357 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 FNTAP49354 379 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 CASP5P51878 434 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 GSCP56915 257 aaPredicted RBP15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 DLGAP5Q15398 846 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 FOXR2Q6PJQ5 311 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 B4GALNT4Q76KP1 1039 aa15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 PRPF38AQ8NAV1 312 aaKnown RBP15.31■□□□□ 0.04
CCHCR1-203ENST00000396268 ZNF473Q8WTR7 871 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms