RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 RNF20Q5VTR2 975 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 CREB3L3Q68CJ9 461 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 WWC2Q6AWC2 1192 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 PDE12Q6L8Q7 609 aaKnown RBP18.21■□□□□ 0.51
VCX3A-201ENST00000381089 MIS18BP1Q6P0N0 1132 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 BMP8AQ7Z5Y6 402 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 SUGP1Q8IWZ8 645 aaKnown RBP18.21■□□□□ 0.51
VCX3A-201ENST00000381089 CYP2W1Q8TAV3 490 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 ATP8B4Q8TF62 1192 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 LRRC2Q9BYS8 371 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 LSG1Q9H089 658 aaKnown RBP18.21■□□□□ 0.51
VCX3A-201ENST00000381089 TMX1Q9H3N1 280 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 TLR9Q9NR96 1032 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 ZNF318Q5VUA4 2279 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 WDFY4Q6ZS81 3184 aa18.21■□□□□ 0.51
VCX3A-201ENST00000381089 TRIOO75962 3097 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 TMEM221A6NGB7 291 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 M0R296 226 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 GATMP50440 423 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 ITGB3BPQ13352 177 aaPredicted RBP18.2■□□□□ 0.5
VCX3A-201ENST00000381089 ZNF484Q5JVG2 852 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 PDXDC2PQ6P474 469 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 TRIM67Q6ZTA4 783 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 SLC24A5Q71RS6 500 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 NIPA1Q7RTP0 329 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 THNSL1Q8IYQ7 743 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 PBXIP1Q96AQ6 731 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 NEK1Q96PY6 1258 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 ADAM2Q99965 735 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 PHF7Q9BWX1 381 aaPredicted RBP18.2■□□□□ 0.5
VCX3A-201ENST00000381089 ERVK-5Q9HDB9 667 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 ZNF302Q9NR11 478 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 RGS18Q9NS28 235 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 TCEAL9Q9UHQ7 104 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 BARX2Q9UMQ3 279 aaPredicted RBP18.2■□□□□ 0.5
VCX3A-201ENST00000381089 USP15Q9Y4E8 981 aaPredicted RBP18.2■□□□□ 0.5
VCX3A-201ENST00000381089 CNTNAP5Q8WYK1 1306 aa18.2■□□□□ 0.5
VCX3A-201ENST00000381089 IGKV6D-21A0A0A0MT36 114 aa18.19■□□□□ 0.5
VCX3A-201ENST00000381089 SMCO2A6NFE2 343 aa18.19■□□□□ 0.5
VCX3A-201ENST00000381089 LOC730098B7Z3J9 87 aa18.19■□□□□ 0.5
VCX3A-201ENST00000381089 DDX39AO00148 427 aaKnown RBP18.19■□□□□ 0.5
VCX3A-201ENST00000381089 MEIS1O00470 390 aa18.19■□□□□ 0.5
VCX3A-201ENST00000381089 SREBF1P36956 1147 aa18.19■□□□□ 0.5
VCX3A-201ENST00000381089 RTN1Q16799 776 aa18.19■□□□□ 0.5
VCX3A-201ENST00000381089 CKAP2LQ8IYA6 745 aa18.19■□□□□ 0.5
VCX3A-201ENST00000381089 PGBD1Q96JS3 809 aa18.19■□□□□ 0.5
VCX3A-201ENST00000381089 ATP6V0A4Q9HBG4 840 aa18.19■□□□□ 0.5
VCX3A-201ENST00000381089 ANO2Q9NQ90 1003 aa18.19■□□□□ 0.5
VCX3A-201ENST00000381089 ST3GAL5Q9UNP4 418 aa18.19■□□□□ 0.5
VCX3A-201ENST00000381089 NOC2LQ9Y3T9 749 aaKnown RBP18.19■□□□□ 0.5
VCX3A-201ENST00000381089 ZBTB43O43298 467 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 FGF18O76093 207 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 GLP2RO95838 553 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 ATF7P17544 494 aaPredicted RBP18.18■□□□□ 0.5
VCX3A-201ENST00000381089 LAG3P18627 525 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 PTPN5P54829 565 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 ZXDAP98168 799 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 CBX2Q14781 532 aaPredicted RBP18.18■□□□□ 0.5
VCX3A-201ENST00000381089 NECTIN1Q15223 517 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 APOA5Q6Q788 366 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 ABHD15Q6UXT9 468 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 KIAA0319LQ8IZA0 1049 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 ESYT1Q9BSJ8 1104 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 TMEM260Q9NX78 707 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 PUF60Q9UHX1 559 aaKnown RBP18.18■□□□□ 0.5
VCX3A-201ENST00000381089 TECTAO75443 2155 aa18.18■□□□□ 0.5
VCX3A-201ENST00000381089 HOXA2O43364 376 aa18.17■□□□□ 0.5
VCX3A-201ENST00000381089 NEFLP07196 543 aa18.17■□□□□ 0.5
VCX3A-201ENST00000381089 CRYBB1P53674 252 aaPredicted RBP18.17■□□□□ 0.5
VCX3A-201ENST00000381089 PLA2G4DQ86XP0 818 aa18.17■□□□□ 0.5
VCX3A-201ENST00000381089 RPGRIP1Q96KN7 1286 aa18.17■□□□□ 0.5
VCX3A-201ENST00000381089 ELAC1Q9H777 363 aaKnown RBP18.17■□□□□ 0.5
VCX3A-201ENST00000381089 TMEM161AQ9NX61 479 aa18.17■□□□□ 0.5
VCX3A-201ENST00000381089 BARHL2Q9NY43 387 aa18.17■□□□□ 0.5
VCX3A-201ENST00000381089 CEP131Q9UPN4 1083 aa18.17■□□□□ 0.5
VCX3A-201ENST00000381089 V9GY48 417 aaPredicted RBP18.17■□□□□ 0.5
VCX3A-201ENST00000381089 PLXNA4Q9HCM2 1894 aa18.17■□□□□ 0.5
VCX3A-201ENST00000381089 FNDC1Q4ZHG4 1894 aaPredicted RBP18.16■□□□□ 0.5
VCX3A-201ENST00000381089 C9IYK1 514 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 IPO5O00410 1097 aaKnown RBP18.16■□□□□ 0.5
VCX3A-201ENST00000381089 PER2O15055 1255 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 MGEA5O60502 916 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 CCNE2O96020 404 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 SETQ01105 290 aaPredicted RBP18.16■□□□□ 0.5
VCX3A-201ENST00000381089 DUSP6Q16828 381 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 KIZQ2M2Z5 673 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 FAM102BQ5T8I3 360 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 MCTP2Q6DN12 878 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 TYW1BQ6NUM6 668 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 SWSAP1Q6NVH7 229 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 CCDC60Q8IWA6 550 aaPredicted RBP18.16■□□□□ 0.5
VCX3A-201ENST00000381089 METTL13Q8N6R0 699 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 COLGALT1Q8NBJ5 622 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 BBXQ8WY36 941 aaPredicted RBP18.16■□□□□ 0.5
VCX3A-201ENST00000381089 OSMRQ99650 979 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 TBC1D22BQ9NU19 505 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 TYW1Q9NV66 732 aaKnown RBP18.16■□□□□ 0.5
VCX3A-201ENST00000381089 LZTS1Q9Y250 596 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 PCDHGC5Q9Y5F6 944 aa18.16■□□□□ 0.5
VCX3A-201ENST00000381089 GOLGA8AA7E2F4 631 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms