RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 MAP2K2P36507 400 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 BPIFB4P59827 614 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 SLFNL1Q499Z3 407 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 NLGN1Q8N2Q7 840 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 SLC13A1Q9BZW2 595 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 RRAGDQ9NQL2 400 aaPredicted RBP17.49■□□□□ 0.39
RGP1-201ENST00000378078 GH2P01242 217 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 LONP1P36776 959 aaKnown RBP17.49■□□□□ 0.39
RGP1-201ENST00000378078 LRRC8AQ8IWT6 810 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 RSPH10B2B2RC85 870 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 CTSHP09668 335 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 RSPH10BP0C881 870 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 RGS9BPQ6ZS82 235 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 ITSN2Q9NZM3 1697 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 ERVV-2B6SEH9 535 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 COBLL1Q53SF7 1204 aa17.49■□□□□ 0.39
RGP1-201ENST00000378078 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.48■□□□□ 0.39
RGP1-201ENST00000378078 SAYSD1Q9NPB0 183 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 PDIA3P30101 505 aaKnown RBP17.48■□□□□ 0.39
RGP1-201ENST00000378078 LRRC74AQ0VAA2 488 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 TMEM63CQ9P1W3 806 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 CCDC197Q8NCU1 140 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 TDRD7Q8NHU6 1098 aaKnown RBP17.48■□□□□ 0.39
RGP1-201ENST00000378078 PPP1R13BQ96KQ4 1090 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 GOLGA8QA0A0J9YX86 632 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 GOLGA8OA6NCC3 632 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 GOLGA8NF8WBI6 632 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 PLCG1P19174 1290 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 CCNYL1Q8N7R7 359 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 PARVGQ9HBI0 331 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 GPC3P51654 580 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 LMNB2Q03252 620 aa17.48■□□□□ 0.39
RGP1-201ENST00000378078 CC2D1AQ6P1N0 951 aaPredicted RBP17.48■□□□□ 0.39
RGP1-201ENST00000378078 TDRD3Q9H7E2 651 aaKnown RBP17.48■□□□□ 0.39
RGP1-201ENST00000378078 C2CD2LO14523 706 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 TTI1O43156 1089 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 TAC1P20366 129 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 PPARGP37231 505 aaPredicted RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 LRRC23Q53EV4 343 aaPredicted RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 SLC10A5Q5PT55 438 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 DYDC2Q96IM9 177 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 NHEJ1Q9H9Q4 299 aaPredicted RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 MAN1B1Q9UKM7 699 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 SIX5Q8N196 739 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 TMEM106CQ9BVX2 250 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 M0QYV0 167 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 PPP2R5BQ15173 497 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 EAF2Q96CJ1 260 aaPredicted RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 RMDN1Q96DB5 314 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 GSDMAQ96QA5 445 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 LBHD1Q9BQE6 289 aaPredicted RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 KLHL11Q9NVR0 708 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 DUOX2Q9NRD8 1548 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 SPDYE5A6NIY4 337 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 SEC24DO94855 1032 aaPredicted RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 ZNF699Q32M78 642 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 SPDYE7PQ495Y7 208 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 TTLL11Q8NHH1 800 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 GIPC2Q8TF65 315 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 ADAM33Q9BZ11 813 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 ZBTB1Q9Y2K1 713 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 EIF3CLB5ME19 914 aaKnown RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 PJA2O43164 708 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 MTMR1Q13613 665 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 SPATA1Q5VX52 437 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 EIF3CQ99613 913 aaKnown RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 RAPGEF6Q8TEU7 1601 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 DNAJC8O75937 253 aaPredicted RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 BRD2P25440 801 aaKnown RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 ATXN3P54252 364 aaPredicted RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 CC2D2BQ6DHV5 1058 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 FGFR1OP2Q9NVK5 253 aa17.47■□□□□ 0.39
RGP1-201ENST00000378078 C6orf203Q9P0P8 240 aaPredicted RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 NOVA2Q9UNW9 492 aaKnown RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 FARP1Q9Y4F1 1045 aaPredicted RBP17.47■□□□□ 0.39
RGP1-201ENST00000378078 NDUFB5O43674 189 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 ZFYVE9O95405 1425 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 DHX9Q08211 1270 aaKnown RBP17.46■□□□□ 0.39
RGP1-201ENST00000378078 BCL2L12Q9HB09 334 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 SLC16A4O15374 487 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 ESRRGP62508 458 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 SNRNP48Q6IEG0 339 aaKnown RBP17.46■□□□□ 0.39
RGP1-201ENST00000378078 LMBRD1Q9NUN5 540 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 WARS2Q9UGM6 360 aaKnown RBP17.46■□□□□ 0.39
RGP1-201ENST00000378078 HSPA6P17066 643 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 RNF168Q8IYW5 571 aaPredicted RBP17.46■□□□□ 0.39
RGP1-201ENST00000378078 P2RX5Q93086 422 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 ZC3H4Q9UPT8 1303 aaKnown RBP17.46■□□□□ 0.39
RGP1-201ENST00000378078 ZNF772Q68DY9 489 aaPredicted RBP17.46■□□□□ 0.39
RGP1-201ENST00000378078 ARL8AQ96BM9 186 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 PCDHA13Q9Y5I0 950 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 COL17A1Q9UMD9 1497 aaPredicted RBP17.46■□□□□ 0.39
RGP1-201ENST00000378078 HUS1O60921 280 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 CYP2D6P10635 497 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 ZNF589Q86UQ0 364 aaPredicted RBP17.46■□□□□ 0.39
RGP1-201ENST00000378078 JPH2Q9BR39 696 aaPredicted RBP17.46■□□□□ 0.39
RGP1-201ENST00000378078 ADA2Q9NZK5 511 aa17.46■□□□□ 0.39
RGP1-201ENST00000378078 ZRANB2O95218 330 aaKnown RBP eCLIP17.45■□□□□ 0.38
RGP1-201ENST00000378078 TJAP1Q5JTD0 557 aa17.45■□□□□ 0.38
RGP1-201ENST00000378078 SPDYAQ5MJ70 313 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms