RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 KRT72Q14CN4 511 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 MORF4L2Q15014 288 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 MAP3K15Q6ZN16 1313 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 C5orf58C9J3I9 102 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 MMS22LQ6ZRQ5 1243 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 SCG3Q8WXD2 468 aaKnown RBP9.68□□□□□ -0.86
PTPRT-206ENST00000373198 CLIC6Q96NY7 704 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 UBA6A0AVT1 1052 aaPredicted RBP9.68□□□□□ -0.86
PTPRT-206ENST00000373198 ESRRAP11474 423 aaPredicted RBP9.68□□□□□ -0.86
PTPRT-206ENST00000373198 SNAP25P60880 206 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 PTGDRQ13258 359 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 SPDYAQ5MJ70 313 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 TSPYL6Q8N831 410 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 PAPOLBQ9NRJ5 636 aaKnown RBP9.68□□□□□ -0.86
PTPRT-206ENST00000373198 MKL2Q9ULH7 1088 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 ITSN2Q9NZM3 1697 aa9.68□□□□□ -0.86
PTPRT-206ENST00000373198 HNRNPCP07910 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 TMPRSS15P98073 1019 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 MEI1Q5TIA1 1274 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 CATSPER4Q7RTX7 472 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 TADA3O75528 432 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 IREB2P48200 963 aaKnown RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 ENAHQ8N8S7 591 aaPredicted RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 SYMPKQ92797 1274 aaKnown RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 EFTUD2Q15029 972 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 CNOT6LQ96LI5 555 aaKnown RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 SMARCAD1Q9H4L7 1026 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 PFKFB1P16118 471 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 GUCY2CP25092 1073 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 AP1B1Q10567 949 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 E4F1Q66K89 784 aaPredicted RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 KRT77Q7Z794 578 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 DCUN1D1Q96GG9 259 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 ATP6V0A4Q9HBG4 840 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 DBNLQ9UJU6 430 aaKnown RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 MAP4P27816 1152 aaKnown RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 GTF2H3Q13889 308 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 CC2D1AQ6P1N0 951 aaPredicted RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 PDXDC2PQ6P474 469 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 ZNF790Q6PG37 636 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 DHX9Q08211 1270 aaKnown RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 SATB2Q9UPW6 733 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 WDR47O94967 919 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 SPON2Q9BUD6 331 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 CTNND1O60716 968 aaKnown RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 GSPT1P15170 499 aaKnown RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 NME3Q13232 169 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 PWP1Q13610 501 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 C1orf146Q5VVC0 180 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 FAM133AQ8N9E0 248 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 ATXN7L3BQ96GX2 97 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 GPBP1L1Q9HC44 474 aaPredicted RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 TRPM2O94759 1503 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 RSPH10B2B2RC85 870 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 RSPH10BP0C881 870 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 PSMC2P35998 433 aaKnown RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 MRPL47Q9HD33 250 aaKnown RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 LRRC41Q15345 812 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 LBHD1Q9BQE6 289 aaPredicted RBP9.67□□□□□ -0.86
PTPRT-206ENST00000373198 COPRSQ9NQ92 184 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 TIAM1Q13009 1591 aa9.67□□□□□ -0.86
PTPRT-206ENST00000373198 RNF103-CHMP3A0A140T963 221 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 DFFAO00273 331 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 RPS8P62241 208 aaKnown RBP9.66□□□□□ -0.86
PTPRT-206ENST00000373198 DEUP1Q05D60 604 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 FSCBQ5H9T9 825 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 C10orf53Q8N6V4 93 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 CAB39Q9Y376 341 aaPredicted RBP9.66□□□□□ -0.86
PTPRT-206ENST00000373198 FOSP01100 380 aaPredicted RBP9.66□□□□□ -0.86
PTPRT-206ENST00000373198 SLC16A1P53985 500 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 FGD2Q7Z6J4 655 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 AIPL1Q9NZN9 384 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 DISP3Q9P2K9 1392 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 GOLGA8IPA6NC78 632 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 GOLGA8JA6NMD2 632 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 CCDC51Q96ER9 411 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 COPS2P61201 443 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 ANKRD40Q6AI12 368 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 DONSONQ9NYP3 566 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 SOS2Q07890 1332 aaPredicted RBP9.66□□□□□ -0.86
PTPRT-206ENST00000373198 SLC27A3Q5K4L6 730 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 AGR3Q8TD06 166 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 ARHGAP45Q92619 1136 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 PCDHGB4Q9UN71 923 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 TBC1D12O60347 775 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 PSAPP07602 524 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 KCNA2P16389 499 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 EPB42P16452 691 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 C8orf34Q49A92 452 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 ALFQ53S48 1182 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 AP1M1Q9BXS5 423 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 GTF2A1LQ9UNN4 478 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 GCKRQ14397 625 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 FAM26FQ5R3K3 315 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 PRR23AA6NEV1 266 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 CCHCR1Q8TD31 782 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 MID2Q9UJV3 735 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 PNMA3Q9UL41 463 aa9.66□□□□□ -0.86
PTPRT-206ENST00000373198 AURKCQ9UQB9 309 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms