RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 ORC2Q13416 577 aaPredicted RBP12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 ZRSR1Q15695 479 aaKnown RBP12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 DTHD1Q6ZMT9 781 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 CCDC60Q8IWA6 550 aaPredicted RBP12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 PHOSPHO2Q8TCD6 241 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 ARNTL2Q8WYA1 636 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 SCLYQ96I15 445 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 ZNF396Q96N95 335 aaPredicted RBP12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 PCYT2Q99447 389 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 KATNAL1Q9BW62 490 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 TRPV6Q9H1D0 765 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 RNPEPQ9H4A4 650 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 C11orf16Q9NQ32 467 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 ERAP1Q9NZ08 941 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 CEP131Q9UPN4 1083 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 NOD1Q9Y239 953 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 GRIN2DO15399 1336 aa12.02□□□□□ -0.49
EXOSC1-203ENST00000370886 SCN5AQ14524 2016 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 VWA3AA6NCI4 1184 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 POTEMA6NI47 508 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 PRR33A8MZF0 331 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 PI4K2BG5E9Z4 385 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 RFXAPO00287 272 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 F2P00734 622 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 SMIM10L2AP0DMW4 78 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 SMIM10L2BP0DMW5 78 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 MARCKSP29966 332 aaPredicted RBP12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 CYP4A11Q02928 519 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 PPP2R5CQ13362 524 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 CTTNQ14247 550 aaKnown RBP12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 TPRNQ4KMQ1 711 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 TPH2Q8IWU9 490 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 C4orf32Q8N8J7 132 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 USP28Q96RU2 1077 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 CERS4Q9HA82 394 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 TRMT13Q9NUP7 481 aaKnown RBP12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 SETD4Q9NVD3 440 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 RGL1Q9NZL6 768 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 HDAC6Q9UBN7 1215 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 ZDHHC9Q9Y397 364 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 TANC1Q9C0D5 1861 aa12.01□□□□□ -0.49
EXOSC1-203ENST00000370886 COL4A4P53420 1690 aaPredicted RBP12□□□□□ -0.49
EXOSC1-203ENST00000370886 POTEB3A0JP26 581 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 DDX11L8A8MPP1 907 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 LGR5O75473 907 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 ATG7O95352 703 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 BRD1O95696 1058 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 HOXD8P13378 290 aaPredicted RBP12□□□□□ -0.49
EXOSC1-203ENST00000370886 RFC2P35250 354 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 ZNF200P98182 395 aaPredicted RBP12□□□□□ -0.49
EXOSC1-203ENST00000370886 ATP2C1P98194 919 aaPredicted RBP12□□□□□ -0.49
EXOSC1-203ENST00000370886 PPFIA1Q13136 1202 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 STK38Q15208 465 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 EPHA7Q15375 998 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 UGCGQ16739 394 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 POTEBQ6S5H4 581 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 PLPPR4Q7Z2D5 763 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 DEFB128Q7Z7B8 93 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 ATP6V0A1Q93050 837 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 DYDC2Q96IM9 177 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 CHAMP1Q96JM3 812 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 LRWD1Q9UFC0 647 aa12□□□□□ -0.49
EXOSC1-203ENST00000370886 A0A087WWV3 80 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 C17orf102A2RUQ5 167 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 EPOPA6NHQ4 379 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 PP2D1A8MPX8 630 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 LAD1O00515 517 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 BMP15O95972 392 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 CYP2C9P11712 490 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 NUCB2P80303 420 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 TAP1Q03518 808 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 DNM1Q05193 864 aaKnown RBP11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 PLCB4Q15147 1175 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 IL17AQ16552 155 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 PTGISQ16647 500 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 GDF6Q6KF10 455 aaPredicted RBP11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 NFRKBQ6P4R8 1299 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 RDM1Q8NG50 284 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 ERMNQ8TAM6 284 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 TRAPPC12Q8WVT3 735 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 KHSRPQ92945 711 aaKnown RBP eCLIP11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 ZBTB10Q96DT7 871 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 EIF2AK1Q9BQI3 630 aaKnown RBP11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 SH2D3AQ9BRG2 576 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 RAB34Q9BZG1 259 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 NRBP2Q9NSY0 501 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 LMCD1Q9NZU5 365 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 SEPT9Q9UHD8 586 aaPredicted RBP11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 EMSYQ7Z589 1322 aa11.99□□□□□ -0.49
EXOSC1-203ENST00000370886 TET1Q8NFU7 2136 aa11.98□□□□□ -0.49
EXOSC1-203ENST00000370886 IGKV6D-21A0A0A0MT36 114 aa11.98□□□□□ -0.49
EXOSC1-203ENST00000370886 TMEM150BA6NC51 233 aa11.98□□□□□ -0.49
EXOSC1-203ENST00000370886 HAS3O00219 553 aa11.98□□□□□ -0.49
EXOSC1-203ENST00000370886 OATP04181 439 aa11.98□□□□□ -0.49
EXOSC1-203ENST00000370886 P4HBP07237 508 aaKnown RBP11.98□□□□□ -0.49
EXOSC1-203ENST00000370886 INSRRP14616 1297 aa11.98□□□□□ -0.49
EXOSC1-203ENST00000370886 CDC25AP30304 524 aa11.98□□□□□ -0.49
EXOSC1-203ENST00000370886 CCT6AP40227 531 aaKnown RBP11.98□□□□□ -0.49
EXOSC1-203ENST00000370886 QARSP47897 775 aaKnown RBP11.98□□□□□ -0.49
EXOSC1-203ENST00000370886 MRE11P49959 708 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms