RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 NPY5RQ15761 445 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 SEL1L2Q5TEA6 688 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 ZNF571Q7Z3V5 609 aaPredicted RBP11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 DTX3LQ8TDB6 740 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 TATDN2Q93075 761 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 TTYH3Q9C0H2 523 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 GLI3P10071 1580 aa11.28□□□□□ -0.6
PRPF38B-201ENST00000370021 FECHP22830 423 aa11.27□□□□□ -0.6
PRPF38B-201ENST00000370021 YY1P25490 414 aa11.27□□□□□ -0.6
PRPF38B-201ENST00000370021 GBP1P32455 592 aa11.27□□□□□ -0.6
PRPF38B-201ENST00000370021 HSPA2P54652 639 aa11.27□□□□□ -0.6
PRPF38B-201ENST00000370021 PLCB3Q01970 1234 aa11.27□□□□□ -0.6
PRPF38B-201ENST00000370021 FUT2Q10981 343 aa11.27□□□□□ -0.6
PRPF38B-201ENST00000370021 C18orf8Q96DM3 657 aa11.27□□□□□ -0.6
PRPF38B-201ENST00000370021 CNOT10Q9H9A5 744 aaKnown RBP11.27□□□□□ -0.6
PRPF38B-201ENST00000370021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.27□□□□□ -0.61e-6■■■□□ 16.4
PRPF38B-201ENST00000370021 DDX25Q9UHL0 483 aaKnown RBP11.27□□□□□ -0.6
PRPF38B-201ENST00000370021 ZBTB21Q9ULJ3 1066 aa11.27□□□□□ -0.6
PRPF38B-201ENST00000370021 EME2A4GXA9 379 aaPredicted RBP11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 THAP12O43422 761 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 ORC4O43929 436 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 EEF2P13639 858 aaKnown RBP11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 PDE6CP51160 858 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 LRRC63Q05C16 580 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 DRP2Q13474 957 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 USH1GQ495M9 461 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 SLC30A10Q6XR72 485 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 FAM228AQ86W67 206 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 SYCE1Q8N0S2 351 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 GUF1Q8N442 669 aaKnown RBP11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 RTCBQ9Y3I0 505 aaKnown RBP11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 POTEFA5A3E0 1075 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 CCDC160A6NGH7 325 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 F8VZ95 297 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 SLC37A4O43826 429 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 BRAFP15056 766 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 ATP2A2P16615 1042 aaKnown RBP11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 PRR16Q569H4 304 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 POTEGQ6S5H5 508 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 POTEEQ6S8J3 1075 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 SUPT20HQ8NEM7 779 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 C1orf54Q8WWF1 131 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 BAP1Q92560 729 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 TMEM237Q96Q45 408 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 FGFBP2Q9BYJ0 223 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 LRRC27Q9C0I9 530 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 ATP6V0A4Q9HBG4 840 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 ALG13Q9NP73 1137 aaKnown RBP11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 USTQ9Y2C2 406 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 MST1RQ04912 1400 aa11.27□□□□□ -0.61
PRPF38B-201ENST00000370021 A0A1W2PQJ5 194 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 SSU72P8A0A1W2PR75 194 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP17L5A8MUK1 530 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 TOM1O60784 492 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 BAG3O95817 575 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 UCHL3P15374 230 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 ADCY8P40145 1251 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP11P51784 963 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 CENPPQ6IPU0 288 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 TMC3Q7Z5M5 1100 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 MYCT1Q8N699 235 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 AK8Q96MA6 479 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 INPP4AQ96PE3 977 aaPredicted RBP11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 C7orf25Q9BPX7 421 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 STMN4Q9H169 189 aaPredicted RBP11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 KCNG1Q9UIX4 513 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 DCTN4Q9UJW0 460 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 NAGPAQ9UK23 515 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 C15orf41Q9Y2V0 281 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP17L15C9J2P7 530 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP17L13C9JLJ4 530 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP17L11C9JVI0 530 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP17L18D6R9N7 530 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP17L22D6RA61 530 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP17L17D6RBQ6 530 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP17L19D6RCP7 530 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP17L20D6RJB6 530 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 AFPP02771 609 aaKnown RBP11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 PLA2G4BP0C869 781 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 DRD4P21917 467 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP17L24Q0WX57 530 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 GRB10Q13322 594 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 TMED2Q15363 201 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 USP17L6PQ6QN14 398 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 ARMC9Q7Z3E5 817 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 SLC35G2Q8TBE7 412 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 RNF217Q8TC41 542 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 ELMO3Q96BJ8 720 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 HEMGNQ9BXL5 484 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 PITPNM3Q9BZ71 974 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 MTFR1LQ9H019 292 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 METTL5Q9NRN9 209 aaKnown RBP11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 hCG_2014768A0A024R1R8 64 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 TMEM120BA0PK00 339 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 TRIM49P0CI25 452 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 TRIM49CP0CI26 452 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 NQO1P15559 274 aaKnown RBP11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 CREB1P16220 341 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms