RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 USP17L8P0C7I0 530 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 ARHGAP4P98171 946 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 MFSD14BQ5SR56 506 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 CCDC24Q8N4L8 307 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 C3orf20Q8ND61 904 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 CDKL2Q92772 493 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 DYNLL2Q96FJ2 89 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 TMEM206Q9H813 350 aa15.01□□□□□ -0.01
SMC5-201ENST00000361138 THRAP3Q9Y2W1 955 aaKnown RBP15.01□□□□□ -0.01
SMC5-201ENST00000361138 SALL3Q9BXA9 1300 aa15□□□□□ -0.01
SMC5-201ENST00000361138 RAD51CO43502 376 aa15□□□□□ -0.01
SMC5-201ENST00000361138 CARSP49589 748 aaKnown RBP15□□□□□ -0.01
SMC5-201ENST00000361138 XKR9Q5GH70 373 aa15□□□□□ -0.01
SMC5-201ENST00000361138 TRAPPC3LQ5T215 181 aa15□□□□□ -0.01
SMC5-201ENST00000361138 LRGUKQ96M69 825 aa15□□□□□ -0.01
SMC5-201ENST00000361138 H7C0C1 242 aa15□□□□□ -0.01
SMC5-201ENST00000361138 RNF8O76064 485 aa15□□□□□ -0.01
SMC5-201ENST00000361138 HAUS5O94927 633 aa15□□□□□ -0.01
SMC5-201ENST00000361138 ATP5OP48047 213 aa15□□□□□ -0.01
SMC5-201ENST00000361138 TTLL11Q8NHH1 800 aa15□□□□□ -0.01
SMC5-201ENST00000361138 PIP4K2CQ8TBX8 421 aa15□□□□□ -0.01
SMC5-201ENST00000361138 MRPL47Q9HD33 250 aaKnown RBP15□□□□□ -0.01
SMC5-201ENST00000361138 EPS15L1Q9UBC2 864 aa15□□□□□ -0.01
SMC5-201ENST00000361138 CCT8L1PA6NM43 557 aa15□□□□□ -0.01
SMC5-201ENST00000361138 FGFR4P22455 802 aa15□□□□□ -0.01
SMC5-201ENST00000361138 FAM98CQ17RN3 349 aaKnown RBP15□□□□□ -0.01
SMC5-201ENST00000361138 TRPM8Q7Z2W7 1104 aa15□□□□□ -0.01
SMC5-201ENST00000361138 SLC17A8Q8NDX2 589 aa15□□□□□ -0.01
SMC5-201ENST00000361138 PLEKHG2Q9H7P9 1386 aa15□□□□□ -0.01
SMC5-201ENST00000361138 GPC5P78333 572 aa15□□□□□ -0.01
SMC5-201ENST00000361138 GPATCH4Q5T3I0 446 aaKnown RBP15□□□□□ -0.01
SMC5-201ENST00000361138 SCYL2Q6P3W7 929 aa15□□□□□ -0.01
SMC5-201ENST00000361138 ATG9AQ7Z3C6 839 aa15□□□□□ -0.01
SMC5-201ENST00000361138 GUF1Q8N442 669 aaKnown RBP15□□□□□ -0.01
SMC5-201ENST00000361138 POTEMA6NI47 508 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 GGPS1O95749 300 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 TTLL1O95922 423 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 ANTXR2P58335 489 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 IGDCC4Q8TDY8 1250 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 PYROXD1Q8WU10 500 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 POMGNT1Q8WZA1 660 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 SCYL1Q96KG9 808 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 FAM81BQ96LP2 452 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 ISCUQ9H1K1 167 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 PARVGQ9HBI0 331 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 NOD2Q9HC29 1040 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 USP15Q9Y4E8 981 aaPredicted RBP14.99□□□□□ -0.01
SMC5-201ENST00000361138 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.99□□□□□ -0.01
SMC5-201ENST00000361138 ZNF804BA4D1E1 1349 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 DLC1Q96QB1 1528 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 ENO4A6NNW6 628 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 SLC8A3P57103 927 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 OLFM3Q96PB7 478 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 TRPC6Q9Y210 931 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 FRMPD1Q5SYB0 1578 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 TOM1L1O75674 476 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 ZRANB2O95218 330 aaKnown RBP eCLIP14.99□□□□□ -0.01
SMC5-201ENST00000361138 MECOMQ03112 1051 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 CRYMQ14894 314 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 MMEL1Q495T6 779 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 CCDC137Q6PK04 289 aaKnown RBP14.99□□□□□ -0.01
SMC5-201ENST00000361138 DGKHQ86XP1 1220 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 TEKT1Q969V4 418 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 TRAIPQ9BWF2 469 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 LCMT1Q9UIC8 334 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 USP21Q9UK80 565 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 PNMA2Q9UL42 364 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 TFR2Q9UP52 801 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 ABCA9Q8IUA7 1624 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 IPO5O00410 1097 aaKnown RBP14.99□□□□□ -0.01
SMC5-201ENST00000361138 KLK7P49862 253 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 AP2B1P63010 937 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 ASPHQ12797 758 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 PPP1R2P3Q6NXS1 205 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 KCTD1Q719H9 257 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 DEPTORQ8TB45 409 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 CFAP36Q96G28 342 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 SNF8Q96H20 258 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 TTC25Q96NG3 672 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 RAB21Q9UL25 225 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 HPS5Q9UPZ3 1129 aa14.99□□□□□ -0.01
SMC5-201ENST00000361138 ARAP3Q8WWN8 1544 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 SSU72P8A0A1W2PR75 194 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 POLR2BP30876 1174 aaKnown RBP14.98□□□□□ -0.01
SMC5-201ENST00000361138 ESRRGP62508 458 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 MRPS9P82933 396 aaKnown RBP14.98□□□□□ -0.01
SMC5-201ENST00000361138 SLC30A9Q6PML9 568 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 MAP3K14Q99558 947 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 MXD3Q9BW11 206 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 VIRMAQ69YN4 1812 aaKnown RBP14.98□□□□□ -0.01
SMC5-201ENST00000361138 TTI1O43156 1089 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 ORC2Q13416 577 aaPredicted RBP14.98□□□□□ -0.01
SMC5-201ENST00000361138 SLC18A3Q16572 532 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 RABL6Q3YEC7 729 aaPredicted RBP14.98□□□□□ -0.01
SMC5-201ENST00000361138 GSG1L2A8MUP6 293 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 NR3C1P04150 777 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 SLC12A2P55011 1212 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 NCAPHQ15003 741 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 SLFN13Q68D06 897 aa14.98□□□□□ -0.01
SMC5-201ENST00000361138 SUGP1Q8IWZ8 645 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms