RNA–Protein interactions for RNA: ENST00000355946.6

SH3PXD2A-202, Transcript of SH3 and PX domains 2A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SH3PXD2A, Length 11,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-202ENST00000355946 PPP1R13BQ96KQ4 1090 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 EFCAB8A8MWE9 144 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 HSPA4LO95757 839 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 NR2F2P24468 414 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 LTKP29376 864 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 TIMM10P62072 90 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 AP1ARQ63HQ0 302 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 CHMP1BQ7LBR1 199 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 OR6B3Q8NGW1 331 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 DPH5Q9H2P9 285 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 SARS2Q9NP81 518 aaKnown RBP9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 PCDHGB4Q9UN71 923 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 GTPBP6O43824 516 aaPredicted RBP9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 GCFC2P16383 781 aaKnown RBP9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 MORF4L2Q15014 288 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 ZSCAN26Q16670 478 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 OOSP2Q86WS3 158 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 BEST2Q8NFU1 509 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 SLAIN2Q9P270 581 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 CD58P19256 250 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 GNGT1P63211 74 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 CCDC157Q569K6 752 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 FAM26FQ5R3K3 315 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 TOGARAM2Q6ZUX3 1019 aa9.04□□□□□ -0.96
SH3PXD2A-202ENST00000355946 ACAD11Q709F0 780 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 DSCC1Q9BVC3 393 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 LRRC53A6NM62 1247 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 PLS3P13797 630 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 ITPRIPL1Q6GPH6 555 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 ATP10AO60312 1499 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 LRRD1A4D1F6 860 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 IQCA1LA6NCM1 817 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 AFPP02771 609 aaKnown RBP9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 APBA1Q02410 837 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 HSPH1Q92598 858 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 KLHL8Q9P2G9 620 aaPredicted RBP9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 GOLGA8JA6NMD2 632 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 ZW10O43264 779 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 CLTAP09496 248 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 CDC37Q16543 378 aaPredicted RBP9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 C8orf34Q49A92 452 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 RPAINQ86UA6 219 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 ACTR5Q9H9F9 607 aaPredicted RBP9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 TTLL4Q14679 1199 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 PPP6R3Q5H9R7 873 aaPredicted RBP9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 FAM160B2Q86V87 743 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 MED4Q9NPJ6 270 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 NDFIP2Q9NV92 336 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 AFF4Q9UHB7 1163 aaKnown RBP9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 EXOC1LA0A1B0GW35 172 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 UBXN2AP68543 259 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 DAB2P98082 770 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 MRPL28Q13084 256 aaKnown RBP9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 PTPROQ16827 1216 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 CIAPIN1Q6FI81 312 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 TSEN34Q9BSV6 310 aaKnown RBP9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 NFU1Q9UMS0 254 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 LEMD3Q9Y2U8 911 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 PRG3Q9Y2Y8 225 aaPredicted RBP9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 USP17L12C9JPN9 530 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 USP17L21D6R901 530 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 CFLARO15519 480 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 GDF11O95390 407 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 KCNA6P17658 529 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 HIF1AQ16665 826 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 MTERF2Q49AM1 385 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 SLC39A2Q9NP94 309 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 TJP2Q9UDY2 1190 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 ANO4Q32M45 955 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 C10orf76Q5T2E6 689 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 LARP4BQ92615 738 aaKnown RBP9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 DBNDD2Q9BQY9 259 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 ZNF341Q9BYN7 854 aa9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 SPATS2LQ9NUQ6 558 aaKnown RBP9.03□□□□□ -0.96
SH3PXD2A-202ENST00000355946 GOLGA8RI6L899 631 aa9.02□□□□□ -0.96
SH3PXD2A-202ENST00000355946 TEX2Q8IWB9 1127 aa9.02□□□□□ -0.96
SH3PXD2A-202ENST00000355946 GUCA1CO95843 209 aa9.02□□□□□ -0.96
SH3PXD2A-202ENST00000355946 PDCLQ13371 301 aa9.02□□□□□ -0.96
SH3PXD2A-202ENST00000355946 RASIP1Q5U651 963 aa9.02□□□□□ -0.96
SH3PXD2A-202ENST00000355946 TRIM48Q8IWZ4 208 aa9.02□□□□□ -0.96
SH3PXD2A-202ENST00000355946 SPATA16Q9BXB7 569 aa9.02□□□□□ -0.96
SH3PXD2A-202ENST00000355946 TRAF3IP3Q9Y228 551 aa9.02□□□□□ -0.96
SH3PXD2A-202ENST00000355946 PCDHA5Q9Y5H7 936 aa9.02□□□□□ -0.96
SH3PXD2A-202ENST00000355946 TRAPPC3O43617 180 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 ORC4O43929 436 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 AP1B1Q10567 949 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 ANKS6Q68DC2 871 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 C16orf87Q6PH81 154 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 RASSF3Q86WH2 238 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 APOBEC3FQ8IUX4 373 aaKnown RBP9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 PDIK1LQ8N165 341 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 STAP1Q9ULZ2 295 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 USP17L3A6NCW0 530 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 USP17L4A6NCW7 530 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 LIG3P49916 1009 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 TEDDM1Q5T9Z0 273 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 BTBD8Q5XKL5 378 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 USP17L1Q7RTZ2 530 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 TTLL6Q8N841 843 aa9.02□□□□□ -0.97
SH3PXD2A-202ENST00000355946 CBX8Q9HC52 389 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms