RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 FOXP3Q9BZS1 431 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 CACNA2D2Q9NY47 1150 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 ATP2C2O75185 946 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 CATSPER3Q86XQ3 398 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 GNAI1P63096 354 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 C3orf62Q6ZUJ4 267 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 RHOT2Q8IXI1 618 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 CMTM5Q96DZ9 223 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 LRRC9Q6ZRR7 1453 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PITPNM2Q9BZ72 1349 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 TMEM247A6NEH6 219 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 H3BRJ5 948 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 ASNA1O43681 348 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 OATP04181 439 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 PRPF40BQ6NWY9 871 aaKnown RBP4.03□□□□□ -1.76
SYNE2-202ENST00000344113 STOX1Q6ZVD7 989 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 TRIM59Q8IWR1 403 aa4.03□□□□□ -1.76
SYNE2-202ENST00000344113 DLATP10515 647 aaKnown RBP4.03□□□□□ -1.77
SYNE2-202ENST00000344113 AGBL2Q5U5Z8 902 aa4.03□□□□□ -1.77
SYNE2-202ENST00000344113 ARHGEF18Q6ZSZ5 1173 aa4.03□□□□□ -1.77
SYNE2-202ENST00000344113 C10orf107Q8IVU9 208 aa4.03□□□□□ -1.77
SYNE2-202ENST00000344113 MARVELD3Q96A59 401 aa4.03□□□□□ -1.77
SYNE2-202ENST00000344113 CCDC134Q9H6E4 229 aa4.03□□□□□ -1.77
SYNE2-202ENST00000344113 SNAP23O00161 211 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 DNAJB5O75953 348 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 MYCP01106 439 aaPredicted RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 IGHDP01880 384 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SLX4IPQ5VYV7 408 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CCDC36Q8IYA8 594 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 TTC9Q92623 222 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 DACT3Q96B18 629 aaPredicted RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 TMX3Q96JJ7 454 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CINPQ9BW66 212 aaPredicted RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CAB39LQ9H9S4 337 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 A6NHS1 94 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 F8W810 466 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 KRT37O76014 449 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CCT4P50991 539 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 NCSTNQ92542 709 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 EVI5LQ96CN4 794 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 XAGE2Q96GT9 111 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 FAM213AQ9BRX8 229 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 NOL6Q9H6R4 1146 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 C12orf10Q9HB07 376 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PRIM2P49643 509 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 OXCT1P55809 520 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PANK1Q8TE04 598 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 NSMCE1Q8WV22 266 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 GLS2Q9UI32 602 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 STK24Q9Y6E0 443 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 RAB11FIP3O75154 756 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PABPC4LP0CB38 370 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 HMOX2P30519 316 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 MED21Q13503 144 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 TWF2Q6IBS0 349 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SSH1Q8WYL5 1049 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 KCNK9Q9NPC2 374 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SNX8Q9Y5X2 465 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 RALGAPBQ86X10 1494 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SNPHO15079 494 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 EFCAB14O75071 495 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CYP2C9P11712 490 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 OTUD4Q01804 1114 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PPP1R2P3Q6NXS1 205 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CCSER2Q9H7U1 834 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 EHMT1Q9H9B1 1298 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 APEX2Q9UBZ4 518 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CBY1Q9Y3M2 126 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SAR1BQ9Y6B6 198 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 APLP1P51693 650 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 WDR17Q8IZU2 1322 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CHL1O00533 1208 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CEBPGP53567 150 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 BEND5Q7L4P6 421 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF598Q86UK7 904 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 DIS3L2Q8IYB7 885 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PDZD8Q8NEN9 1154 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ADGRL1O94910 1474 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 KRT14P02533 472 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 COL6A1P12109 1028 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 GNAT2P19087 354 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 BFSP1Q12934 665 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 LNPKQ9C0E8 428 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SLC6A15Q9H2J7 730 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF287Q9HBT7 754 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF229Q9UJW7 825 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 IDI1Q13907 227 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PITRM1Q5JRX3 1037 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 BLOC1S2Q6QNY1 142 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 PRPF18Q99633 342 aaKnown RBP4.02□□□□□ -1.77
SYNE2-202ENST00000344113 NCOR1P1Q9H4R4 102 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 AS3MTQ9HBK9 375 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SENP2Q9HC62 589 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 CYP4F12Q9HCS2 524 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 SCAMP1O15126 338 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 MYL1P05976 194 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 MX2P20592 715 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 IL10P22301 178 aa4.02□□□□□ -1.77
SYNE2-202ENST00000344113 DPYSQ14117 519 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms