RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 FAM20AQ96MK3 541 aa16.47■□□□□ 0.23
ERCC1-203ENST00000340192 ST18O60284 1047 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 GJB5O95377 273 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 C22orf31O95567 290 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 OATP04181 439 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 GUCY1B3Q02153 619 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 FAM117BQ6P1L5 589 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 TSHZ1Q6ZSZ6 1077 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 POTEDQ86YR6 584 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 KIAA0319LQ8IZA0 1049 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 NME8Q8N427 588 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 HAS1Q92839 578 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 C8orf76Q96K31 380 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 VAV3Q9UKW4 847 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 CEP131Q9UPN4 1083 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 TRPV2Q9Y5S1 764 aa16.46■□□□□ 0.23
ERCC1-203ENST00000340192 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.45■□□□□ 0.22
ERCC1-203ENST00000340192 LCHNA4D1U4 455 aa16.45■□□□□ 0.22
ERCC1-203ENST00000340192 TBX3O15119 743 aa16.45■□□□□ 0.22
ERCC1-203ENST00000340192 ARHGEF15O94989 841 aa16.45■□□□□ 0.22
ERCC1-203ENST00000340192 HMGN5P82970 282 aaKnown RBP16.45■□□□□ 0.22
ERCC1-203ENST00000340192 PPP2R5CQ13362 524 aa16.45■□□□□ 0.22
ERCC1-203ENST00000340192 MYOCDQ8IZQ8 938 aa16.45■□□□□ 0.22
ERCC1-203ENST00000340192 METTL13Q8N6R0 699 aa16.45■□□□□ 0.22
ERCC1-203ENST00000340192 TBC1D32Q96NH3 1257 aa16.45■□□□□ 0.22
ERCC1-203ENST00000340192 RAD9AQ99638 391 aa16.45■□□□□ 0.22
ERCC1-203ENST00000340192 CELF4Q9BZC1 486 aaKnown RBP16.45■□□□□ 0.22
ERCC1-203ENST00000340192 NRBP2Q9NSY0 501 aa16.45■□□□□ 0.22
ERCC1-203ENST00000340192 MYO9BQ13459 2157 aa16.44■□□□□ 0.22
ERCC1-203ENST00000340192 EML1O00423 815 aa16.44■□□□□ 0.22
ERCC1-203ENST00000340192 MARCH6O60337 910 aa16.44■□□□□ 0.22
ERCC1-203ENST00000340192 CD52P31358 61 aa16.44■□□□□ 0.22
ERCC1-203ENST00000340192 TAP1Q03518 808 aa16.44■□□□□ 0.22
ERCC1-203ENST00000340192 SAFBQ15424 915 aaKnown RBP eCLIP16.44■□□□□ 0.22
ERCC1-203ENST00000340192 USP38Q8NB14 1042 aa16.44■□□□□ 0.22
ERCC1-203ENST00000340192 BANK1Q8NDB2 785 aa16.44■□□□□ 0.22
ERCC1-203ENST00000340192 MAFAQ8NHW3 353 aaPredicted RBP16.44■□□□□ 0.22
ERCC1-203ENST00000340192 GAS2L1Q99501 681 aaPredicted RBP16.44■□□□□ 0.22
ERCC1-203ENST00000340192 AGO3Q9H9G7 860 aaKnown RBP16.44■□□□□ 0.22
ERCC1-203ENST00000340192 CERS4Q9HA82 394 aa16.44■□□□□ 0.22
ERCC1-203ENST00000340192 SQORQ9Y6N5 450 aa16.44■□□□□ 0.22
ERCC1-203ENST00000340192 KDM3AQ9Y4C1 1321 aa16.44■□□□□ 0.22
ERCC1-203ENST00000340192 WNT7AO00755 349 aa16.43■□□□□ 0.22
ERCC1-203ENST00000340192 MAGEB2O15479 319 aa16.43■□□□□ 0.22
ERCC1-203ENST00000340192 CD2BP2O95400 341 aaKnown RBP16.43■□□□□ 0.22
ERCC1-203ENST00000340192 BAG4O95429 457 aaKnown RBP16.43■□□□□ 0.22
ERCC1-203ENST00000340192 SLFN12Q8IYM2 578 aa16.43■□□□□ 0.22
ERCC1-203ENST00000340192 FAM184AQ8NB25 1140 aa16.43■□□□□ 0.22
ERCC1-203ENST00000340192 TOP1MTQ969P6 601 aa16.43■□□□□ 0.22
ERCC1-203ENST00000340192 CDHR5Q9HBB8 845 aa16.43■□□□□ 0.22
ERCC1-203ENST00000340192 SEPT9Q9UHD8 586 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-203ENST00000340192 GINS2Q9Y248 185 aa16.43■□□□□ 0.22
ERCC1-203ENST00000340192 COL4A4P53420 1690 aaPredicted RBP16.43■□□□□ 0.22
ERCC1-203ENST00000340192 TMEM150BA6NC51 233 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 UPP2O95045 317 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 STBD1O95210 358 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 VTNP04004 478 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 CLCN3P51790 818 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 PSMC5P62195 406 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 HTRA4P83105 476 aaPredicted RBP16.42■□□□□ 0.22
ERCC1-203ENST00000340192 ADGRE1Q14246 886 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 CALCRLQ16602 461 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 KIZQ2M2Z5 673 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 XKR3Q5GH77 459 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 EFCAB12Q6NXP0 572 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 SPRED2Q7Z698 418 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 LRRC71Q8N4P6 559 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 IL27Q8NEV9 243 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 FBXO18Q8NFZ0 1043 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 PPP1R16BQ96T49 567 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 NIFKQ9BYG3 293 aaKnown RBP16.42■□□□□ 0.22
ERCC1-203ENST00000340192 PADI3Q9ULW8 664 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 INSL6Q9Y581 213 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 A0A0C4DFX4 3053 aa16.42■□□□□ 0.22
ERCC1-203ENST00000340192 ARID2Q68CP9 1835 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 LINC01553A4QN01 128 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 DDX11L8A8MPP1 907 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 ENPP3O14638 875 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 NEMFO60524 1076 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 IGFBP4P22692 258 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 TMOD1P28289 359 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 SPIRE1Q08AE8 756 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 TBC1D8BQ0IIM8 1120 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 PAK2Q13177 524 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 TARBP2Q15633 366 aaKnown RBP16.41■□□□□ 0.22
ERCC1-203ENST00000340192 TMEM266Q2M3C6 531 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 MTERF2Q49AM1 385 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 NCAPH2Q6IBW4 605 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 LINC01465Q8N7H1 131 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 ARNTL2Q8WYA1 636 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 TMX3Q96JJ7 454 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 FOXP1Q9H334 677 aaPredicted RBP16.41■□□□□ 0.22
ERCC1-203ENST00000340192 AKT3Q9Y243 479 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 NLRC5Q86WI3 1866 aa16.41■□□□□ 0.22
ERCC1-203ENST00000340192 TTC3P53804 2025 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 EPOPA6NHQ4 379 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 RFXAPO00287 272 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 GPR32O75388 356 aa16.4■□□□□ 0.22
ERCC1-203ENST00000340192 P4HBP07237 508 aaKnown RBP16.4■□□□□ 0.22
ERCC1-203ENST00000340192 ATP2B1P20020 1258 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms