RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SYCP1Q15431 976 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 UNC13DQ70J99 1090 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 RNF19AQ9NV58 838 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 ARGLU1Q9NWB6 273 aaPredicted RBP17.45■□□□□ 0.38
PDGFB-201ENST00000331163 DOCK2Q92608 1830 aa17.45■□□□□ 0.38
PDGFB-201ENST00000331163 STAT5BP51692 787 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 CASP5P51878 434 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 BIRC3Q13489 604 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 ARHGAP44Q17R89 818 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 KMT5AQ9NQR1 393 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 ZNF112Q9UJU3 913 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 C6orf222P0C671 652 aaPredicted RBP17.44■□□□□ 0.38
PDGFB-201ENST00000331163 EPHA7Q15375 998 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 CST9Q5W186 159 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 RGMBQ6NW40 437 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 RHPN2Q8IUC4 686 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 PITPNM2Q9BZ72 1349 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 DDX60LQ5H9U9 1706 aaKnown RBP17.44■□□□□ 0.38
PDGFB-201ENST00000331163 DNAH12Q6ZR08 3092 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 SPRYD7Q5W111 196 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 RINT1Q6NUQ1 792 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 VSIG10LQ86VR7 867 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 CHST13Q8NET6 341 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 POMGNT1Q8WZA1 660 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 KCNMB3Q9NPA1 279 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 WRAP73Q9P2S5 460 aaPredicted RBP17.44■□□□□ 0.38
PDGFB-201ENST00000331163 NOD1Q9Y239 953 aa17.44■□□□□ 0.38
PDGFB-201ENST00000331163 NID2Q14112 1375 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 PNMA6AP0CW24 399 aaPredicted RBP17.43■□□□□ 0.38
PDGFB-201ENST00000331163 CASP14P31944 242 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 KLK7P49862 253 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 DMP1Q13316 513 aaPredicted RBP17.43■□□□□ 0.38
PDGFB-201ENST00000331163 HSDL1Q3SXM5 330 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 ARMCX5Q6P1M9 558 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 STXBP4Q6ZWJ1 553 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 CCDC60Q8IWA6 550 aaPredicted RBP17.43■□□□□ 0.38
PDGFB-201ENST00000331163 AFG1LQ8WV93 481 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 PPP1R13BQ96KQ4 1090 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 MYL3P08590 195 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 TRIM49P0CI25 452 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 TRIM49CP0CI26 452 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 MMP14P50281 582 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 PCNX4Q63HM2 1172 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 L3MBTL3Q96JM7 780 aaPredicted RBP17.43■□□□□ 0.38
PDGFB-201ENST00000331163 KBTBD4Q9NVX7 518 aa17.43■□□□□ 0.38
PDGFB-201ENST00000331163 TMCO5BA8MYB1 307 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 PPP1R3GB7ZBB8 358 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 EIF3JO75822 258 aaKnown RBP17.42■□□□□ 0.38
PDGFB-201ENST00000331163 CCNE2O96020 404 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 FDX1P10109 184 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 NOVP48745 357 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 COPB1P53618 953 aaKnown RBP17.42■□□□□ 0.38
PDGFB-201ENST00000331163 PSMC5P62195 406 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 KRT76Q01546 638 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 APBA1Q02410 837 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 TRIML1Q8N9V2 468 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 FRMD4BQ9Y2L6 1034 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 A0A0G2JLL6 359 aaPredicted RBP17.42■□□□□ 0.38
PDGFB-201ENST00000331163 PHACTR2O75167 634 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 SPATA31C1P0DKV0 1188 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 MDM2Q00987 491 aaPredicted RBP17.42■□□□□ 0.38
PDGFB-201ENST00000331163 ARMCX2Q7L311 632 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 PRRT2Q7Z6L0 340 aaPredicted RBP17.42■□□□□ 0.38
PDGFB-201ENST00000331163 MB21D1Q8N884 522 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 LENG9Q96B70 501 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 CDHR1Q96JP9 859 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 EDIL3O43854 480 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 KRT13P13646 458 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 CAPN2P17655 700 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 LMAN1P49257 510 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 BEX3Q00994 111 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 TTLL4Q14679 1199 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 NYAP1Q6ZVC0 841 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 PROCA1Q8NCQ7 364 aaPredicted RBP17.42■□□□□ 0.38
PDGFB-201ENST00000331163 KIAA0895Q8NCT3 520 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 ENOX1Q8TC92 643 aaKnown RBP17.42■□□□□ 0.38
PDGFB-201ENST00000331163 MRFAP1L1Q96HT8 127 aa17.42■□□□□ 0.38
PDGFB-201ENST00000331163 IGLV3-22A0A075B6J6 115 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 DENND3A2RUS2 1198 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 FGFR1OPO95684 399 aaKnown RBP17.41■□□□□ 0.38
PDGFB-201ENST00000331163 CCNE1P24864 410 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 E4F1Q66K89 784 aaPredicted RBP17.41■□□□□ 0.38
PDGFB-201ENST00000331163 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.41■□□□□ 0.38
PDGFB-201ENST00000331163 SOWAHBA6NEL2 793 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 PSMD10O75832 226 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 STRN3Q13033 797 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 THNSL1Q8IYQ7 743 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 CUEDC2Q9H467 287 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 AKR1B10O60218 316 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 CSPG5O95196 566 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 EYA4O95677 639 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 EPB41P11171 864 aaKnown RBP17.41■□□□□ 0.38
PDGFB-201ENST00000331163 LIG4P49917 911 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 CLCN3P51790 818 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 SP2Q02086 613 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 RRAGAQ7L523 313 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 KIAA1328Q86T90 577 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 FAM114A1Q8IWE2 563 aa17.41■□□□□ 0.38
PDGFB-201ENST00000331163 ARMCX3Q9UH62 379 aaPredicted RBP17.41■□□□□ 0.38
PDGFB-201ENST00000331163 LUC7L2Q9Y383 392 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms