RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 MIIPQ5JXC2 388 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 IFIT1BQ5T764 474 aaKnown RBP11.34□□□□□ -0.59
UPF3B-201ENST00000276201 LRIG3Q6UXM1 1119 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 CMTR1Q8N1G2 835 aaKnown RBP11.34□□□□□ -0.59
UPF3B-201ENST00000276201 MAGEC3Q8TD91 643 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 WHAMMQ8TF30 809 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 AK8Q96MA6 479 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 C7orf25Q9BPX7 421 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 IL17RBQ9NRM6 502 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 TOMM22Q9NS69 142 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 TRIM17Q9Y577 477 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 RLFQ13129 1914 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 SSU72P8A0A1W2PR75 194 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 TMCO5BA8MYB1 307 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 HMGB1P1B2RPK0 211 aaPredicted RBP11.34□□□□□ -0.59
UPF3B-201ENST00000276201 PEX10O60683 326 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 ECM2O94769 699 aaPredicted RBP11.34□□□□□ -0.59
UPF3B-201ENST00000276201 PLEKHA8P1O95397 391 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 TTLL1O95922 423 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 SMTNP53814 917 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 PMS1P54277 932 aaKnown RBP11.34□□□□□ -0.59
UPF3B-201ENST00000276201 FAM110CQ1W6H9 321 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 FKBP15Q5T1M5 1219 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 IQCA1Q86XH1 822 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 GSPT2Q8IYD1 628 aaKnown RBP11.34□□□□□ -0.59
UPF3B-201ENST00000276201 LRRC47Q8N1G4 583 aaKnown RBP11.34□□□□□ -0.59
UPF3B-201ENST00000276201 TSEN2Q8NCE0 465 aaKnown RBP11.34□□□□□ -0.59
UPF3B-201ENST00000276201 MKL1Q969V6 931 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 CCDC42Q96M95 316 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 GOPCQ9HD26 462 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 TXNRD2Q9NNW7 524 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 AGPAT5Q9NUQ2 364 aa11.34□□□□□ -0.59
UPF3B-201ENST00000276201 TRIM49BA6NDI0 452 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 B4DLN1 442 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 M0R2N6 131 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 NDUFAB1O14561 156 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 CCDC82Q8N4S0 544 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 OTUD6BQ8N6M0 293 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 SYN2Q92777 582 aaPredicted RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 STAMQ92783 540 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 ARL8AQ96BM9 186 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 TANGO6Q9C0B7 1094 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 ACTR5Q9H9F9 607 aaPredicted RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 RNF216Q9NWF9 866 aaPredicted RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 MORF4L1Q9UBU8 362 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 SIK3Q9Y2K2 1263 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 BHMG1C9JSJ3 638 aaPredicted RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 ANKRD65E5RJM6 399 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 WDR46O15213 610 aaKnown RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 ZMYND10O75800 440 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 NDUFB10O96000 172 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 PSMC4P43686 418 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 NOVP48745 357 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 ORC2Q13416 577 aaPredicted RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 KIF22Q14807 665 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 PKN2Q16513 984 aaKnown RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 PTGISQ16647 500 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 ASTE1Q2TB18 679 aaPredicted RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 C6orf89Q6UWU4 347 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 RRP36Q96EU6 259 aaKnown RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 CNOT6LQ96LI5 555 aaKnown RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 ZIM3Q96PE6 472 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 IFIH1Q9BYX4 1025 aaKnown RBP11.33□□□□□ -0.6
UPF3B-201ENST00000276201 CXorf56Q9H5V9 222 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 RBPJLQ9UBG7 517 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 LRWD1Q9UFC0 647 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 SYNPO2Q9UMS6 1093 aa11.33□□□□□ -0.6
UPF3B-201ENST00000276201 MGAMO43451 1857 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 ATP8B3O60423 1300 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 PARP14Q460N5 1801 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 F5H6K3 240 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 CHUKO15111 745 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 RAD21O60216 631 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 CNMDO75829 334 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 FGFR1OPO95684 399 aaKnown RBP11.32□□□□□ -0.6
UPF3B-201ENST00000276201 MYBP10242 640 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 LSP1P33241 339 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 NLRP5P59047 1200 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 KLRC3Q07444 240 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 ACTN3Q08043 901 aaPredicted RBP11.32□□□□□ -0.6
UPF3B-201ENST00000276201 FAM83BQ5T0W9 1011 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 C8orf74Q6P047 294 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 LBX2Q6XYB7 198 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 SRBD1Q8N5C6 995 aaKnown RBP11.32□□□□□ -0.6
UPF3B-201ENST00000276201 ARFGAP2Q8N6H7 521 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 P3H4Q92791 437 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 NUCKS1Q9H1E3 243 aaKnown RBP11.32□□□□□ -0.6
UPF3B-201ENST00000276201 CAPN6Q9Y6Q1 641 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 A0A0G2JMZ2 1700 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 PPP1R37O75864 691 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 HSPA9P38646 679 aaKnown RBP11.32□□□□□ -0.6
UPF3B-201ENST00000276201 MNAT1P51948 309 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 KIF11P52732 1056 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 CFAP221Q4G0U5 840 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 CFAP58Q5T655 872 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 NAA35Q5VZE5 725 aa11.32□□□□□ -0.6
UPF3B-201ENST00000276201 FBXO46Q6PJ61 603 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms