RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 A0A0G2JLL6 359 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-201ENST00000269318 IRF6O14896 467 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 SLC16A3O15427 465 aaKnown RBP18.3■□□□□ 0.52
CCDC40-201ENST00000269318 PPP1R37O75864 691 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 AKAP3O75969 853 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 RPL13P26373 211 aaKnown RBP18.3■□□□□ 0.52
CCDC40-201ENST00000269318 YWHABP31946 246 aaKnown RBP18.3■□□□□ 0.52
CCDC40-201ENST00000269318 PSMC5P62195 406 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 PPATQ06203 517 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 PRRT2Q7Z6L0 340 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-201ENST00000269318 CDCA5Q96FF9 252 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 ELP3Q9H9T3 547 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 ZNF215Q9UL58 517 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-201ENST00000269318 STAM2O75886 525 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 NOL4O94818 638 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 PROCA1Q8NCQ7 364 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-201ENST00000269318 NEK11Q8NG66 645 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 ZC3H15Q8WU90 426 aaKnown RBP18.3■□□□□ 0.52
CCDC40-201ENST00000269318 MOV10L1Q9BXT6 1211 aaKnown RBP18.3■□□□□ 0.52
CCDC40-201ENST00000269318 IKZF4Q9H2S9 585 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 NHEJ1Q9H9Q4 299 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-201ENST00000269318 BTBD7Q9P203 1132 aa18.3■□□□□ 0.52
CCDC40-201ENST00000269318 ARMCX3Q9UH62 379 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-201ENST00000269318 SLU7O95391 586 aaKnown RBP18.29■□□□□ 0.52
CCDC40-201ENST00000269318 ABL1P00519 1130 aa18.29■□□□□ 0.52
CCDC40-201ENST00000269318 KCNH2Q12809 1159 aa18.29■□□□□ 0.52
CCDC40-201ENST00000269318 DPY19L2Q6NUT2 758 aa18.29■□□□□ 0.52
CCDC40-201ENST00000269318 STXBP4Q6ZWJ1 553 aa18.29■□□□□ 0.52
CCDC40-201ENST00000269318 ERO1BQ86YB8 467 aa18.29■□□□□ 0.52
CCDC40-201ENST00000269318 CCDC170Q8IYT3 715 aa18.29■□□□□ 0.52
CCDC40-201ENST00000269318 ZNF710Q8N1W2 664 aa18.29■□□□□ 0.52
CCDC40-201ENST00000269318 CLMNQ96JQ2 1002 aa18.29■□□□□ 0.52
CCDC40-201ENST00000269318 SPDYE5A6NIY4 337 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 CLIC2O15247 247 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 PEX10O60683 326 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 CASQ1P31415 396 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 EPHX2P34913 555 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 CASP4P49662 377 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 HERVK_113P62684 666 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 PPP2R3AQ06190 1150 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 RIOX2Q8IUF8 465 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 KSR1Q8IVT5 923 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 ANKRD13AQ8IZ07 590 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 OTUD5Q96G74 571 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 BORCS6Q96GS4 357 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 METTL14Q9HCE5 456 aaKnown RBP18.28■□□□□ 0.52
CCDC40-201ENST00000269318 ANKEF1Q9NU02 776 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 PCDHB13Q9Y5F0 798 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 NFASCO94856 1347 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 TMEM150BA6NC51 233 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 LRRC53A6NM62 1247 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 BACH1O14867 736 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 KIF5CO60282 957 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 MAPTP10636 758 aaKnown RBP18.28■□□□□ 0.52
CCDC40-201ENST00000269318 ARHGAP29Q52LW3 1261 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 MOB2Q70IA6 237 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 CDHR1Q96JP9 859 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 IWS1Q96ST2 819 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 CEP72Q9P209 647 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 TCEAL9Q9UHQ7 104 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 PCDHA10Q9Y5I2 948 aa18.28■□□□□ 0.52
CCDC40-201ENST00000269318 KIAA1217Q5T5P2 1943 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 SPATA31C2B4DYI2 1134 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 EIF3CLB5ME19 914 aaKnown RBP18.27■□□□□ 0.52
CCDC40-201ENST00000269318 CXCL11O14625 94 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 CYLC1P35663 651 aaPredicted RBP18.27■□□□□ 0.52
CCDC40-201ENST00000269318 NCBP1Q09161 790 aaKnown RBP18.27■□□□□ 0.52
CCDC40-201ENST00000269318 PDXDC1Q6P996 788 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 GADL1Q6ZQY3 521 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 ZNF662Q6ZS27 426 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 RRAGAQ7L523 313 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 SMAP1Q8IYB5 467 aaPredicted RBP18.27■□□□□ 0.52
CCDC40-201ENST00000269318 DNERQ8NFT8 737 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 ERO1AQ96HE7 468 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 EIF3CQ99613 913 aaKnown RBP18.27■□□□□ 0.52
CCDC40-201ENST00000269318 TIPINQ9BVW5 301 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 LSM14BQ9BX40 385 aaKnown RBP18.27■□□□□ 0.52
CCDC40-201ENST00000269318 DMAC2Q9NW81 257 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 ARHGAP20Q9P2F6 1191 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 KCNH4Q9UQ05 1017 aa18.27■□□□□ 0.52
CCDC40-201ENST00000269318 MYH11P35749 1972 aa18.27■□□□□ 0.51
CCDC40-201ENST00000269318 USO1O60763 962 aaKnown RBP18.26■□□□□ 0.51
CCDC40-201ENST00000269318 EPB41P11171 864 aaKnown RBP18.26■□□□□ 0.51
CCDC40-201ENST00000269318 XRCC5P13010 732 aaKnown RBP18.26■□□□□ 0.51
CCDC40-201ENST00000269318 NF2P35240 595 aa18.26■□□□□ 0.51
CCDC40-201ENST00000269318 UTP14CQ5TAP6 766 aaKnown RBP18.26■□□□□ 0.51
CCDC40-201ENST00000269318 DPY19L2P1Q6NXN4 242 aa18.26■□□□□ 0.51
CCDC40-201ENST00000269318 ANO5Q75V66 913 aa18.26■□□□□ 0.51
CCDC40-201ENST00000269318 MAEAQ7L5Y9 396 aa18.26■□□□□ 0.51
CCDC40-201ENST00000269318 ANKRD7Q92527 254 aa18.26■□□□□ 0.51
CCDC40-201ENST00000269318 SLC35C1Q96A29 364 aa18.26■□□□□ 0.51
CCDC40-201ENST00000269318 GBP3Q9H0R5 595 aa18.26■□□□□ 0.51
CCDC40-201ENST00000269318 AGPAT3Q9NRZ7 376 aa18.26■□□□□ 0.51
CCDC40-201ENST00000269318 LARSQ9P2J5 1176 aaKnown RBP18.26■□□□□ 0.51
CCDC40-201ENST00000269318 SRCAPQ6ZRS2 3230 aa18.26■□□□□ 0.51
CCDC40-201ENST00000269318 PFASO15067 1338 aa18.26■□□□□ 0.51
CCDC40-201ENST00000269318 URI1O94763 535 aaPredicted RBP18.26■□□□□ 0.51
CCDC40-201ENST00000269318 STBD1O95210 358 aa18.26■□□□□ 0.51
CCDC40-201ENST00000269318 AFPP02771 609 aaKnown RBP18.26■□□□□ 0.51
CCDC40-201ENST00000269318 PLEKP08567 350 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms