RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ENPP3O14638 875 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 GPR37L1O60883 481 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 ATG7O95352 703 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 FOSP01100 380 aaPredicted RBP11.78□□□□□ -0.52
VPS50-201ENST00000251739 RB1P06400 928 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 ARP10275 920 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 IL9P15248 144 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 BMPR1AP36894 532 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 LTBRP36941 435 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 PLA2G5P39877 138 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 ACTR2P61160 394 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 PLCB4Q15147 1175 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 CTC1Q2NKJ3 1217 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 ADCK5Q3MIX3 580 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 PLPPR4Q7Z2D5 763 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 SKAP1Q86WV1 359 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 FIBCD1Q8N539 461 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 TCEANC2Q96MN5 208 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 NEK1Q96PY6 1258 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 KRTAP3-2Q9BYR7 98 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 NSUN3Q9H649 340 aaKnown RBP11.78□□□□□ -0.52
VPS50-201ENST00000251739 BARHL2Q9NY43 387 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 PCDHA2Q9Y5H9 948 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 IGSF9BQ9UPX0 1349 aa11.78□□□□□ -0.52
VPS50-201ENST00000251739 IGLV3-22A0A075B6J6 115 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 PI4K2BG5E9Z4 385 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 GRM6O15303 877 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 GPR37O15354 613 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 ZBTB43O43298 467 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 DGKIO75912 1065 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 CCNE2O96020 404 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 CD52P31358 61 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 CTNNB1P35222 781 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 ADCY7P51828 1080 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 NAPAP54920 295 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 PTGDRQ13258 359 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 AP3B2Q13367 1082 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 CAMK1Q14012 370 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 RTN1Q16799 776 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 PUS10Q3MIT2 529 aaKnown RBP11.77□□□□□ -0.53
VPS50-201ENST00000251739 RNF20Q5VTR2 975 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 PTCRAQ6ISU1 281 aaPredicted RBP11.77□□□□□ -0.53
VPS50-201ENST00000251739 DHX32Q7L7V1 743 aaKnown RBP11.77□□□□□ -0.53
VPS50-201ENST00000251739 NIPA1Q7RTP0 329 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 RTN4RL1Q86UN2 441 aaPredicted RBP11.77□□□□□ -0.53
VPS50-201ENST00000251739 GPIHBP1Q8IV16 184 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 TRAPPC12Q8WVT3 735 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 KCNB2Q92953 911 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 PGBD1Q96JS3 809 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 C11orf84Q9BUA3 381 aaPredicted RBP11.77□□□□□ -0.53
VPS50-201ENST00000251739 FAM49AQ9H0Q0 323 aaPredicted RBP11.77□□□□□ -0.53
VPS50-201ENST00000251739 LMAN2LQ9H0V9 348 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 AGO4Q9HCK5 861 aaKnown RBP11.77□□□□□ -0.53
VPS50-201ENST00000251739 RWDD3Q9Y3V2 267 aa11.77□□□□□ -0.53
VPS50-201ENST00000251739 SMIM35A0A1B0GVV1 85 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 ESYT2A0FGR8 921 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 ZBTB42B2RXF5 422 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 H3BQ06 376 aaPredicted RBP11.76□□□□□ -0.53
VPS50-201ENST00000251739 DHX15O43143 795 aaKnown RBP11.76□□□□□ -0.53
VPS50-201ENST00000251739 CDC27P30260 824 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 SLC26A2P50443 739 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 IGBP1P78318 339 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 TMEM31Q5JXX7 168 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 DMRTA1Q5VZB9 504 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 ABHD15Q6UXT9 468 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 GJD3Q8N144 294 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 SDF4Q9BRK5 362 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 PLVAPQ9BX97 442 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 FTHL17Q9BXU8 183 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 GLT8D2Q9H1C3 349 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 AZI2Q9H6S1 392 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 PADI3Q9ULW8 664 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 TRPV2Q9Y5S1 764 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 V9GY48 417 aaPredicted RBP11.76□□□□□ -0.53
VPS50-201ENST00000251739 TECTAO75443 2155 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 ZDBF2Q9HCK1 2354 aa11.76□□□□□ -0.53
VPS50-201ENST00000251739 KLF18A0A0U1RQI7 1052 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 SMCO2A6NFE2 343 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 GOLGA8AA7E2F4 631 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 GOLGA8BA8MQT2 603 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 FAM86B1E9PN63 330 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 ADAMTS3O15072 1205 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 MMP1P03956 469 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 CYP3A4P08684 503 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 FAM86B2P0C5J1 330 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 STAT5BP51692 787 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 ZP2Q05996 745 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 HYAL1Q12794 435 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 IER5Q5VY09 327 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 SYNE3Q6ZMZ3 975 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 FAM43BQ6ZT52 329 aaPredicted RBP11.75□□□□□ -0.53
VPS50-201ENST00000251739 CENPQQ7L2Z9 268 aaPredicted RBP11.75□□□□□ -0.53
VPS50-201ENST00000251739 NPAS4Q8IUM7 802 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 CCDC60Q8IWA6 550 aaPredicted RBP11.75□□□□□ -0.53
VPS50-201ENST00000251739 CMTR2Q8IYT2 770 aaKnown RBP11.75□□□□□ -0.53
VPS50-201ENST00000251739 ATP8B4Q8TF62 1192 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 P2RX5Q93086 422 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 SLC4A5Q9BY07 1137 aa11.75□□□□□ -0.53
VPS50-201ENST00000251739 CELF4Q9BZC1 486 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms