RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 NELFCDQ8IXH7 590 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 DHX37Q8IY37 1157 aaKnown RBP14.33□□□□□ -0.11
HIF3A-201ENST00000244302 C4orf19Q8IY42 314 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 SEMA6BQ9H3T3 888 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 RNF186Q9NXI6 227 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 TSKSQ9UJT2 592 aa14.33□□□□□ -0.11
HIF3A-201ENST00000244302 MKI67P46013 3256 aaKnown RBP14.33□□□□□ -0.11
HIF3A-201ENST00000244302 PVALEFA0A1B0GWK0 134 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 ARHGEF35A5YM69 484 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 CAVIN2O95810 425 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 MYBP10242 640 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 TGFB3P10600 412 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 NMT1P30419 496 aaKnown RBP14.33□□□□□ -0.12
HIF3A-201ENST00000244302 MYL5Q02045 173 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 MAPK7Q13164 816 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 NEDD9Q14511 834 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 ZC2HC1CQ53FD0 456 aaPredicted RBP14.33□□□□□ -0.12
HIF3A-201ENST00000244302 ANKRD40Q6AI12 368 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 CNNM4Q6P4Q7 775 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 SMAP1Q8IYB5 467 aaPredicted RBP14.33□□□□□ -0.12
HIF3A-201ENST00000244302 ZNF302Q9NR11 478 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 RMND1Q9NWS8 449 aa14.33□□□□□ -0.12
HIF3A-201ENST00000244302 FRMD3A2A2Y4 597 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 HIP1RO75146 1068 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 HOXD13P35453 343 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 LACTBP83111 547 aaPredicted RBP14.32□□□□□ -0.12
HIF3A-201ENST00000244302 ARHGAP1Q07960 439 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 TTLL4Q14679 1199 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 MIS18BP1Q6P0N0 1132 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 SEPT9Q9UHD8 586 aaPredicted RBP14.32□□□□□ -0.12
HIF3A-201ENST00000244302 MAFBQ9Y5Q3 323 aaPredicted RBP14.32□□□□□ -0.12
HIF3A-201ENST00000244302 STK24Q9Y6E0 443 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 IGKV6D-21A0A0A0MT36 114 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 B4DLN1 442 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 PRPF6O94906 941 aaKnown RBP14.32□□□□□ -0.12
HIF3A-201ENST00000244302 LYPLA2O95372 231 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 RBM10P98175 930 aaKnown RBP14.32□□□□□ -0.12
HIF3A-201ENST00000244302 PRKCZQ05513 592 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 MTERF2Q49AM1 385 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 FAM26FQ5R3K3 315 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 CREBRFQ8IUR6 639 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 SPC24Q8NBT2 197 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 ENOX1Q8TC92 643 aaKnown RBP14.32□□□□□ -0.12
HIF3A-201ENST00000244302 SCFD2Q8WU76 684 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 AFG1LQ8WV93 481 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 SCFD1Q8WVM8 642 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 SEPT1Q8WYJ6 367 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 CEP170P1Q96L14 293 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 FIZ1Q96SL8 496 aa14.32□□□□□ -0.12
HIF3A-201ENST00000244302 DUSP9Q99956 384 aaKnown RBP14.32□□□□□ -0.12
HIF3A-201ENST00000244302 DIS3Q9Y2L1 958 aaKnown RBP14.32□□□□□ -0.12
HIF3A-201ENST00000244302 WDR81Q562E7 1941 aa14.31□□□□□ -0.12
HIF3A-201ENST00000244302 SLC26A4O43511 780 aa14.31□□□□□ -0.12
HIF3A-201ENST00000244302 FLT3LGP49771 235 aa14.31□□□□□ -0.12
HIF3A-201ENST00000244302 STAT5BP51692 787 aa14.31□□□□□ -0.12
HIF3A-201ENST00000244302 PAK1Q13153 545 aa14.31□□□□□ -0.12
HIF3A-201ENST00000244302 OLFML2BQ68BL8 750 aa14.31□□□□□ -0.12
HIF3A-201ENST00000244302 ZNF467Q7Z7K2 595 aaPredicted RBP14.31□□□□□ -0.12
HIF3A-201ENST00000244302 MYCT1Q8N699 235 aa14.31□□□□□ -0.12
HIF3A-201ENST00000244302 NEK9Q8TD19 979 aa14.31□□□□□ -0.12
HIF3A-201ENST00000244302 MPHOSPH6Q99547 160 aaKnown RBP14.31□□□□□ -0.12
HIF3A-201ENST00000244302 KIFC3Q9BVG8 833 aa14.31□□□□□ -0.12
HIF3A-201ENST00000244302 SYNRGQ9UMZ2 1314 aa14.31□□□□□ -0.12
HIF3A-201ENST00000244302 IKBKBO14920 756 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 ZNF865P0CJ78 1059 aaPredicted RBP14.3□□□□□ -0.12
HIF3A-201ENST00000244302 ERCC5P28715 1186 aaPredicted RBP14.3□□□□□ -0.12
HIF3A-201ENST00000244302 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.3□□□□□ -0.12
HIF3A-201ENST00000244302 IRF2BP1Q8IU81 584 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 CCDC65Q8IXS2 484 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 TRPV1Q8NER1 839 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 KIAA1524Q8TCG1 905 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 TRAPPC12Q8WVT3 735 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 TRIM5Q9C035 493 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 RNPEPQ9H4A4 650 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 IGSF9BQ9UPX0 1349 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 RBM47A0AV96 593 aaKnown RBP14.3□□□□□ -0.12
HIF3A-201ENST00000244302 NOP56O00567 594 aaKnown RBP14.3□□□□□ -0.12
HIF3A-201ENST00000244302 HOXC6P09630 235 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 ZNF286BP0CG31 522 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 DRP2Q13474 957 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 TTI2Q6NXR4 508 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 RDM1Q8NG50 284 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 BSNDQ8WZ55 320 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 TRIB2Q92519 343 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 GLG1Q92896 1179 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 VTA1Q9NP79 307 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 XPNPEP1Q9NQW7 623 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 IFNKQ9P0W0 207 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 DBR1Q9UK59 544 aaKnown RBP14.3□□□□□ -0.12
HIF3A-201ENST00000244302 USP20Q9Y2K6 914 aa14.3□□□□□ -0.12
HIF3A-201ENST00000244302 SMTNL1A8MU46 457 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 DYNC1LI2O43237 492 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-201ENST00000244302 ZNF18P17022 549 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 MUTP22033 750 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 FAM102BQ5T8I3 360 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 SPATA1Q5VX52 437 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 CD99L2Q8TCZ2 262 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 ATP6V0A1Q93050 837 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 TMEM143Q96AN5 459 aa14.29□□□□□ -0.12
HIF3A-201ENST00000244302 CEP89Q96ST8 783 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms