RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 RGS2P41220 211 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 PHKA1P46020 1223 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 STX17P56962 302 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 YWHAGP61981 247 aaKnown RBP eCLIP3.68□□□□□ -1.82
NEB-201ENST00000172853 KIF23Q02241 960 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 KLHL30Q0D2K2 578 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 MIIPQ5JXC2 388 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 NOSTRINQ8IVI9 506 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 DCAF5Q96JK2 942 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 INTS13Q9NVM9 706 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ZBTB1Q9Y2K1 713 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 E2F6O75461 281 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 DDHD2O94830 711 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 IFNB1P01574 187 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SNAP25P60880 206 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 PPARDQ03181 441 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 MTFR1Q15390 333 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 RPS6KA1Q15418 735 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SPOPLQ6IQ16 392 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 HDXQ7Z353 690 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 RASEFQ8IZ41 740 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ADAMTS8Q9UP79 889 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 L3MBTL1Q9Y468 752 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 BTBD18B2RXH4 712 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 PPEF1O14829 653 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 SLC25A24Q6NUK1 477 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 GAS2L3Q86XJ1 694 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ABCC11Q96J66 1382 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SUPT3HO75486 399 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 CARSP49589 748 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 FCGRTP55899 365 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 FSCBQ5H9T9 825 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 TTC38Q5R3I4 469 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 HLA-DQA1Q5Y7H0 255 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 PASD1Q8IV76 773 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 S100A13Q99584 98 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 NDE1Q9NXR1 346 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ARL3P36405 182 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 PRKAA1Q13131 559 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 DENND6AQ8IWF6 608 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SCAIQ8N9R8 606 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 CFAP61Q8NHU2 1237 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 BRF1Q92994 677 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ZSWIM6Q9HCJ5 1215 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ANLNQ9NQW6 1124 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 TMCC3Q9ULS5 477 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 RUVBL2Q9Y230 463 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 MROH5Q6ZUA9 1318 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 H7C0S8 307 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SGK1O00141 431 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 EPB42P16452 691 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 S100GP29377 79 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SHROOM1Q2M3G4 852 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 BRAPQ7Z569 592 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 FGD2Q7Z6J4 655 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 CSGALNACT2Q8N6G5 542 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 KLHL25Q9H0H3 589 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 VPS8Q8N3P4 1428 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 FGD5Q6ZNL6 1462 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 PI4KAP2A4QPH2 592 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SMIM22K7EJ46 135 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 HNRNPRO43390 633 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 LIG3P49916 1009 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 OR6B2Q6IFH4 312 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 PI4KAP1Q8N8J0 262 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 RIN2Q8WYP3 895 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 PPARGC1AQ9UBK2 798 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 AFF4Q9UHB7 1163 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 DCTN2Q13561 401 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 REXO1Q8N1G1 1221 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 HEXIM2Q96MH2 286 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 COPS7BQ9H9Q2 264 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 FAM32AQ9Y421 112 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 COL4A3BPQ9Y5P4 624 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 NCAM2O15394 837 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 PRPSAP2O60256 369 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 MLNP12872 115 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 AP3B2Q13367 1082 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 TAS2R42Q7RTR8 314 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 KCTD6Q8NC69 237 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SLC4A9Q96Q91 983 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 MRPL47Q9HD33 250 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 FIS1Q9Y3D6 152 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 B2RBV5 119 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 AP1G2O75843 785 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 IGFBP4P22692 258 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 CLK3P49761 638 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 TTLL4Q14679 1199 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 CCDC85BQ15834 202 aaPredicted RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 CWF19L2Q2TBE0 894 aaKnown RBP3.68□□□□□ -1.82
NEB-201ENST00000172853 TMTC3Q6ZXV5 915 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 MB21D1Q8N884 522 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ATL2Q8NHH9 583 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 SCFD1Q8WVM8 642 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 CENPTQ96BT3 561 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 KLC2Q9H0B6 622 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 KLF15Q9UIH9 416 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 ZNF711Q9Y462 761 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 CARNS1A5YM72 827 aa3.68□□□□□ -1.82
NEB-201ENST00000172853 LUC7L3O95232 432 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms