RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 CbsQ91WT9 561 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Igf2bp3Q9CPN8 579 aaKnown RBP12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Scgb2b12S4R2L0 112 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gm8994E9PV04 411 aaKnown RBP12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Spa17Q62252 149 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Srp68Q8BMA6 625 aaKnown RBP12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Kctd6Q8BNL5 237 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Arfgef2A2A5R2 1792 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 AtrnQ9WU60 1428 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Myh2G3UW82 1942 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Hsf3D0VYS2 492 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Nrg3O35181 713 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Hspa9P38647 679 aaKnown RBP12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gdpd4Q3TT99 632 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Pnma5Q5DTT8 618 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Igdcc3Q8BQC3 813 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Znf609Q8BZ47 1413 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cdk17Q8K0D0 523 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 HibchQ8QZS1 385 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 McamQ8R2Y2 648 aaKnown RBP12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Rnf4Q9QZS2 194 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Myh1Q5SX40 1942 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Dnajb6O54946 365 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Znf76Q8BMU0 568 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cadps2Q8BYR5 1297 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cbwd1Q8VEH6 393 aa12.24□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Sept7O55131 436 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Pabpn1lQ5XFR0 273 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Trpc6Q61143 930 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Hoxa13Q62424 386 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 HlfQ8BW74 295 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 GanQ8CA72 597 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Abcf3Q8K268 709 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Eid1Q9DCR4 169 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Adarb2Q9JI20 745 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Serpinb6cW4VSP4 379 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Map2P20357 1828 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cfap221A9Q751 836 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Klra5Q60652 266 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Retreg2Q6NS82 541 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Kbtbd4Q8R179 534 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Pcdhgb4Q91XX6 912 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Pcdhb5Q91XZ5 792 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 IydQ9DCX8 285 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gtf2iQ9ESZ8 998 aaKnown RBP12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 JmyQ9QXM1 983 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Eef1bO70251 225 aaKnown RBP12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Nr2e1Q64104 385 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Sec23ipQ6NZC7 998 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Ccdc15Q8C9M2 810 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Psmd2Q8VDM4 908 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Rfwd2Q9R1A8 733 aaKnown RBP12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Pik3c2aQ61194 1686 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gm1661E9Q963 441 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gm5814J3QP80 125 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 DtnbO70585 659 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Klra9Q2TJJ8 266 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Ankmy2Q3TPE9 440 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 PhkbQ7TSH2 1085 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Ankzf1Q80UU1 748 aaKnown RBP12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 AarsQ8BGQ7 968 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Trpa1Q8BLA8 1125 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Vps52Q8C754 723 aaKnown RBP12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Mrfap1Q9CQL7 125 aa12.23□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Lrrc74aA0A1Y7VMD6 494 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 R3hdm1E9Q9Q2 1135 aaKnown RBP12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Klrb1Q0ZUP1 214 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Sh3gl3Q62421 347 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 PigsQ6PD26 555 aaKnown RBP12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Sestd1Q80UK0 696 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Enoph1Q8BGB7 257 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Rev1Q920Q2 1249 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Cep83Q9D5R3 692 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Arhgef7Q9ES28 862 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Tmed2Q9R0Q3 201 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Znf638Q61464 1960 aaKnown RBP12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Chrna9G3X8Z7 479 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Idh1O88844 414 aaKnown RBP12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 HpdP49429 393 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 PctpP53808 214 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Mcl1P97287 331 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Abl2Q4JIM5 1182 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Foxd4Q60688 444 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Ces1eQ64176 562 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Q6DFW0 481 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Scfd2Q8BTY8 684 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 IarsQ8BU30 1262 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Nxnl2Q9D531 156 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Lonrf2B2RT44 518 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 RcvrnP34057 202 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Dusp19Q8K4T5 220 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Ears2Q9CXJ1 523 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Rexo2Q9D8S4 237 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Edf1Q9JMG1 148 aaKnown RBP12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Myh10Q61879 1976 aaKnown RBP12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gpr161B2RPY5 545 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Gm6583E9Q8Z1 469 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Speer2E9Q9U2 264 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Vmn2r68L7N2B3 851 aa12.22□□□□□ -0.45
Topbp1-201ENSMUST00000035164 Nmt1O70310 496 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms