RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 LSP1P33241 339 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 TNNC1P63316 161 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 TRIM31Q9BZY9 425 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 NEUROG2Q9H2A3 272 aa18.11■□□□□ 0.49
HNRNPU-228ENST00000640306 CDK5RAP2Q96SN8 1893 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 KIF4AO95239 1232 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 INPP5BP32019 993 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 SLC12A3P55017 1021 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 IKQ13123 557 aaPredicted RBP18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 PPANQ9NQ55 473 aaKnown RBP18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 RNF14Q9UBS8 474 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 PCDHAC2Q9Y5I4 1007 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 IGKV6D-41A0A0C4DH26 115 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 PON1P27169 355 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 HOXD13P35453 343 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 FLT3P36888 993 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 SKOR1P84550 965 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 KSR1Q8IVT5 923 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 CYP2W1Q8TAV3 490 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 AMACRQ9UHK6 382 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 NAGPAQ9UK23 515 aa18.1■□□□□ 0.49
HNRNPU-228ENST00000640306 GIT2Q14161 759 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 SEPT2Q15019 361 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 SLC27A3Q5K4L6 730 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 METTL13Q8N6R0 699 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 FAM163AQ96GL9 167 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 CELF4Q9BZC1 486 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 BCS1LQ9Y276 419 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 AFPP02771 609 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 XRCC5P13010 732 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 U2AF1L4Q8WU68 220 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 RGS17Q9UGC6 210 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 SART1O43290 800 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 GFPT2O94808 682 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 GCNT3O95395 438 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 SERPINB2P05120 415 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 POLD1P28340 1107 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 HOXA13P31271 388 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 COPB2P35606 906 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 UBLCP1Q8WVY7 318 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 BHMT2Q9H2M3 363 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 DPH5Q9H2P9 285 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 TAF1DQ9H5J8 278 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 EFCC1Q9HA90 598 aa18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 ATF5Q9Y2D1 282 aaPredicted RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 NOC2LQ9Y3T9 749 aaKnown RBP18.09■□□□□ 0.49
HNRNPU-228ENST00000640306 GCFC2P16383 781 aaKnown RBP18.08■□□□□ 0.49
HNRNPU-228ENST00000640306 HSD17B3P37058 310 aa18.08■□□□□ 0.49
HNRNPU-228ENST00000640306 KNOP1Q1ED39 458 aaKnown RBP18.08■□□□□ 0.49
HNRNPU-228ENST00000640306 PEX26Q7Z412 305 aa18.08■□□□□ 0.49
HNRNPU-228ENST00000640306 TBC1D22AQ8WUA7 517 aa18.08■□□□□ 0.49
HNRNPU-228ENST00000640306 ATP6V1G3Q96LB4 118 aa18.08■□□□□ 0.49
HNRNPU-228ENST00000640306 KCNMB3Q9NPA1 279 aa18.08■□□□□ 0.49
HNRNPU-228ENST00000640306 RGL1Q9NZL6 768 aa18.08■□□□□ 0.49
HNRNPU-228ENST00000640306 E7EVH7 732 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 KRIT1O00522 736 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 DAPK3O43293 454 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 ABCB4P21439 1286 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 ARHGAP4P98171 946 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 HDLBPQ00341 1268 aaKnown RBP18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 PRPF4BQ13523 1007 aaKnown RBP18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 RNF187Q5TA31 235 aaPredicted RBP18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 ICE2Q659A1 982 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 POTEAQ6S8J7 498 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 DAAM2Q86T65 1068 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 PIGOQ8TEQ8 1089 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 GCNT4Q9P109 453 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 DNM3Q9UQ16 869 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 CAPN7Q9Y6W3 813 aa18.08■□□□□ 0.48
HNRNPU-228ENST00000640306 USP11P51784 963 aa18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 GTF2A1P52655 376 aaPredicted RBP18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 SF3A3Q12874 501 aaKnown RBP eCLIP18.07■□□□□ 0.486e-7■■■□□ 16
HNRNPU-228ENST00000640306 HYIQ5T013 277 aa18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 GPATCH4Q5T3I0 446 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 C15orf52Q6ZUT6 534 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 RBM17Q96I25 401 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 OSGEPQ9NPF4 335 aa18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 EEF2P13639 858 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 TMOD1P28289 359 aa18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 ECHS1P30084 290 aa18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 CTNNA1P35221 906 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 MARSP56192 900 aaKnown RBP18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 UAP1Q16222 522 aaPredicted RBP18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 PPP1R18Q6NYC8 613 aa18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 KDM7AQ6ZMT4 941 aa18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 WHAMMQ8TF30 809 aa18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 RUSC1Q9BVN2 902 aa18.07■□□□□ 0.48
HNRNPU-228ENST00000640306 GOLGA6L10A6NI86 522 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 FAM86B1E9PN63 330 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 MYO1FO00160 1098 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 ZBTB39O15060 712 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 CHMP2AO43633 222 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 PPP1R37O75864 691 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 FAM86B2P0C5J1 330 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 TPCN2Q8NHX9 752 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 LRRC4CQ9HCJ2 640 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 SEPT11Q9NVA2 429 aaKnown RBP18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 H0YHG0 523 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 MEIS2O14770 477 aa18.06■□□□□ 0.48
HNRNPU-228ENST00000640306 TTI1O43156 1089 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms