RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 ADAMTS3O15072 1205 aa19.2■□□□□ 0.66
SMN2-216ENST00000638794 SCG2P13521 617 aa19.2■□□□□ 0.66
SMN2-216ENST00000638794 TCEAL5Q5H9L2 206 aa19.2■□□□□ 0.66
SMN2-216ENST00000638794 Q6ZUG5 572 aa19.2■□□□□ 0.66
SMN2-216ENST00000638794 NIPA1Q7RTP0 329 aa19.2■□□□□ 0.66
SMN2-216ENST00000638794 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.2■□□□□ 0.66
SMN2-216ENST00000638794 KCNB2Q92953 911 aa19.2■□□□□ 0.66
SMN2-216ENST00000638794 ZNF689Q96CS4 500 aaPredicted RBP19.2■□□□□ 0.66
SMN2-216ENST00000638794 JAKMIP1Q96N16 626 aaKnown RBP19.2■□□□□ 0.66
SMN2-216ENST00000638794 NSUN3Q9H649 340 aaKnown RBP19.2■□□□□ 0.66
SMN2-216ENST00000638794 CD320Q9NPF0 282 aa19.2■□□□□ 0.66
SMN2-216ENST00000638794 SQORQ9Y6N5 450 aa19.2■□□□□ 0.66
SMN2-216ENST00000638794 EVPLQ92817 2033 aa19.2■□□□□ 0.66
SMN2-216ENST00000638794 MYH9P35579 1960 aaKnown RBP19.19■□□□□ 0.66
SMN2-216ENST00000638794 C5orf42Q9H799 3197 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 IGLV3-22A0A075B6J6 115 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 CCDC196A0A1B0GTZ2 297 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 BMPR1AP36894 532 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 SLC26A2P50443 739 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 BTG3Q14201 252 aaPredicted RBP19.19■□□□□ 0.66
SMN2-216ENST00000638794 MTHFD1LQ6UB35 978 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 ABHD15Q6UXT9 468 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 RTN4RL1Q86UN2 441 aaPredicted RBP19.19■□□□□ 0.66
SMN2-216ENST00000638794 PLA2G4DQ86XP0 818 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 NEK9Q8TD19 979 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 CRYGNQ8WXF5 182 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 KHSRPQ92945 711 aaKnown RBP eCLIP19.19■□□□□ 0.66
SMN2-216ENST00000638794 CLP1Q92989 425 aaKnown RBP19.19■□□□□ 0.66
SMN2-216ENST00000638794 BRF1Q92994 677 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 C11orf84Q9BUA3 381 aaPredicted RBP19.19■□□□□ 0.66
SMN2-216ENST00000638794 PADI3Q9ULW8 664 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 RWDD3Q9Y3V2 267 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 IGSF9BQ9UPX0 1349 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 NID2Q14112 1375 aa19.19■□□□□ 0.66
SMN2-216ENST00000638794 SMIM35A0A1B0GVV1 85 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 ESYT2A0FGR8 921 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 H3BQ06 376 aaPredicted RBP19.18■□□□□ 0.66
SMN2-216ENST00000638794 BACH1O14867 736 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 DHX15O43143 795 aaKnown RBP19.18■□□□□ 0.66
SMN2-216ENST00000638794 DGKIO75912 1065 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 RB1P06400 928 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 IL9P15248 144 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 PAK2Q13177 524 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 PTCRAQ6ISU1 281 aaPredicted RBP19.18■□□□□ 0.66
SMN2-216ENST00000638794 CCDC60Q8IWA6 550 aaPredicted RBP19.18■□□□□ 0.66
SMN2-216ENST00000638794 CRIPAKQ8N1N5 446 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 ATP8B4Q8TF62 1192 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 PABPC5Q96DU9 382 aaKnown RBP19.18■□□□□ 0.66
SMN2-216ENST00000638794 UIMC1Q96RL1 719 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 FTHL17Q9BXU8 183 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 CELF4Q9BZC1 486 aaKnown RBP19.18■□□□□ 0.66
SMN2-216ENST00000638794 ZMYND12Q9H0C1 365 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 SNX14Q9Y5W7 946 aa19.18■□□□□ 0.66
SMN2-216ENST00000638794 WDR81Q562E7 1941 aa19.17■□□□□ 0.66
SMN2-216ENST00000638794 IPO5O00410 1097 aaKnown RBP19.17■□□□□ 0.66
SMN2-216ENST00000638794 GRM6O15303 877 aa19.17■□□□□ 0.66
SMN2-216ENST00000638794 CYP3A4P08684 503 aa19.17■□□□□ 0.66
SMN2-216ENST00000638794 HSPA4P34932 840 aa19.17■□□□□ 0.66
SMN2-216ENST00000638794 COL19A1Q14993 1142 aa19.17■□□□□ 0.66
SMN2-216ENST00000638794 PKN1Q16512 942 aa19.17■□□□□ 0.66
SMN2-216ENST00000638794 FAM160B1Q5W0V3 765 aa19.17■□□□□ 0.66
SMN2-216ENST00000638794 BLOC1S2Q6QNY1 142 aa19.17■□□□□ 0.66
SMN2-216ENST00000638794 FAM178BQ8IXR5 827 aa19.17■□□□□ 0.66
SMN2-216ENST00000638794 ZNF302Q9NR11 478 aa19.17■□□□□ 0.66
SMN2-216ENST00000638794 KDM3AQ9Y4C1 1321 aa19.17■□□□□ 0.66
SMN2-216ENST00000638794 GRXCR2A6NFK2 248 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 HBP1O60381 514 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 KLRC1P26715 233 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 KRT76Q01546 638 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 TMEM266Q2M3C6 531 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 PDXDC2PQ6P474 469 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 EP400NLQ6ZTU2 488 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 NPAS4Q8IUM7 802 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 REXO1Q8N1G1 1221 aaKnown RBP19.16■□□□□ 0.66
SMN2-216ENST00000638794 NME8Q8N427 588 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 CCDC12Q8WUD4 166 aaPredicted RBP19.16■□□□□ 0.66
SMN2-216ENST00000638794 PHKBQ93100 1093 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 ZNF577Q9BSK1 485 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 LMAN2LQ9H0V9 348 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 TMX1Q9H3N1 280 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 C6orf50Q9HD87 102 aa19.16■□□□□ 0.66
SMN2-216ENST00000638794 MRPL42Q9Y6G3 142 aaKnown RBP19.16■□□□□ 0.66
SMN2-216ENST00000638794 ZBTB42B2RXF5 422 aa19.15■□□□□ 0.66
SMN2-216ENST00000638794 PRPF3O43395 683 aaKnown RBP19.15■□□□□ 0.66
SMN2-216ENST00000638794 SETQ01105 290 aaPredicted RBP19.15■□□□□ 0.66
SMN2-216ENST00000638794 SWSAP1Q6NVH7 229 aa19.15■□□□□ 0.66
SMN2-216ENST00000638794 MIS18BP1Q6P0N0 1132 aa19.15■□□□□ 0.66
SMN2-216ENST00000638794 FBXL16Q8N461 479 aa19.15■□□□□ 0.66
SMN2-216ENST00000638794 PLVAPQ9BX97 442 aa19.15■□□□□ 0.66
SMN2-216ENST00000638794 CLDND1Q9NY35 253 aa19.15■□□□□ 0.66
SMN2-216ENST00000638794 GINS2Q9Y248 185 aa19.15■□□□□ 0.66
SMN2-216ENST00000638794 COL1A2P08123 1366 aa19.15■□□□□ 0.66
SMN2-216ENST00000638794 PPFIA3O75145 1194 aa19.14■□□□□ 0.65
SMN2-216ENST00000638794 CSPG5O95196 566 aa19.14■□□□□ 0.65
SMN2-216ENST00000638794 ATP4AP20648 1035 aa19.14■□□□□ 0.65
SMN2-216ENST00000638794 RPS6KB1P23443 525 aa19.14■□□□□ 0.65
SMN2-216ENST00000638794 NTRK3Q16288 839 aa19.14■□□□□ 0.65
SMN2-216ENST00000638794 PUS10Q3MIT2 529 aaKnown RBP19.14■□□□□ 0.65
SMN2-216ENST00000638794 PAN2Q504Q3 1202 aaKnown RBP19.14■□□□□ 0.65
SMN2-216ENST00000638794 MCTP2Q6DN12 878 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms