RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 HGSNATQ68CP4 663 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 PPP1R18Q6NYC8 613 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 LRIG3Q6UXM1 1119 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 TPTE2Q6XPS3 522 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 BICDL1Q6ZP65 573 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 EIF1ADQ8N9N8 165 aaKnown RBP14.22□□□□□ -0.13
CHD1L-210ENST00000622533 AGAP11Q8TF27 550 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 DDX12PQ92771 950 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 AP1M1Q9BXS5 423 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 RIOX1Q9H6W3 641 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 EBF2Q9HAK2 575 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 NLRC4Q9NPP4 1024 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 SPATS2LQ9NUQ6 558 aaKnown RBP14.22□□□□□ -0.13
CHD1L-210ENST00000622533 BIN2Q9UBW5 565 aaPredicted RBP14.22□□□□□ -0.13
CHD1L-210ENST00000622533 SLC26A4O43511 780 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 KLRC1P26715 233 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 ADCY7P51828 1080 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 NAB2Q15742 525 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 KRT71Q3SY84 523 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 C10orf76Q5T2E6 689 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 DYMQ7RTS9 669 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 ZNF804AQ7Z570 1209 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 C3orf20Q8ND61 904 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 SNX29Q8TEQ0 813 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 ZNF570Q96NI8 536 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 SPAG5Q96R06 1193 aa14.22□□□□□ -0.13
CHD1L-210ENST00000622533 DIAPH2O60879 1101 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 AP1G2O75843 785 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 INPP4AQ96PE3 977 aaPredicted RBP14.21□□□□□ -0.13
CHD1L-210ENST00000622533 ISCUQ9H1K1 167 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 ATP6V0A2Q9Y487 856 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 KDM4FA0A1W2PPD8 638 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 CTNND1O60716 968 aaKnown RBP14.21□□□□□ -0.13
CHD1L-210ENST00000622533 MARSP56192 900 aaKnown RBP14.21□□□□□ -0.13
CHD1L-210ENST00000622533 TNNC1P63316 161 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 CDCA2Q69YH5 1023 aaPredicted RBP14.21□□□□□ -0.13
CHD1L-210ENST00000622533 RUFY4Q6ZNE9 571 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 USP38Q8NB14 1042 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 SLC44A5Q8NCS7 719 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 CCDC197Q8NCU1 140 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 PRCCQ92733 491 aaPredicted RBP14.21□□□□□ -0.13
CHD1L-210ENST00000622533 CHMP6Q96FZ7 201 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 PIGSQ96S52 555 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 NAP1L4Q99733 375 aaKnown RBP14.21□□□□□ -0.13
CHD1L-210ENST00000622533 PCDHGC5Q9Y5F6 944 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 SNED1Q8TER0 1413 aa14.21□□□□□ -0.13
CHD1L-210ENST00000622533 KDM3AQ9Y4C1 1321 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 KCNK3O14649 394 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 IRF6O14896 467 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 NOVP48745 357 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 KCNQ4P56696 695 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 ARID5AQ03989 594 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 BIRC3Q13489 604 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 SLC18A3Q16572 532 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 ZCWPW2Q504Y3 356 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 ASPRV1Q53RT3 343 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 FAM83BQ5T0W9 1011 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 CAPRIN2Q6IMN6 1127 aaKnown RBP14.21□□□□□ -0.14
CHD1L-210ENST00000622533 USP17L2Q6R6M4 530 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 FAM43BQ6ZT52 329 aaPredicted RBP14.21□□□□□ -0.14
CHD1L-210ENST00000622533 PACSIN1Q9BY11 444 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 YIPF3Q9GZM5 350 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 NT5C3AQ9H0P0 336 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 NARFQ9UHQ1 456 aa14.21□□□□□ -0.14
CHD1L-210ENST00000622533 BTNL10A8MVZ5 291 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 GHRP10912 638 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 KCNMA1Q12791 1236 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 IFI16Q16666 785 aaKnown RBP14.2□□□□□ -0.14
CHD1L-210ENST00000622533 TXNRD3Q86VQ6 643 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 DNAAF5Q86Y56 855 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 MAPKAPK5Q8IW41 473 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 LINC00116Q8NCU8 138 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
CHD1L-210ENST00000622533 PNMA2Q9UL42 364 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 COL24A1Q17RW2 1714 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 TRAF5O00463 557 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 KCNJ2P63252 427 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 AP1ARQ63HQ0 302 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 SMIM5Q71RC9 77 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 SLF2Q8IX21 1173 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 SAAL1Q96ER3 474 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 XPO6Q96QU8 1125 aaKnown RBP14.2□□□□□ -0.14
CHD1L-210ENST00000622533 MTFR1LQ9H019 292 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 DDX47Q9H0S4 455 aaKnown RBP14.2□□□□□ -0.14
CHD1L-210ENST00000622533 AGAP1Q9UPQ3 857 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 JAG2Q9Y219 1238 aa14.2□□□□□ -0.14
CHD1L-210ENST00000622533 DAPK3O43293 454 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 MYBP10242 640 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 COASYQ13057 564 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 FAM26FQ5R3K3 315 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 THEMIS2Q5TEJ8 643 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 MEI1Q5TIA1 1274 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 C15orf52Q6ZUT6 534 aaKnown RBP14.19□□□□□ -0.14
CHD1L-210ENST00000622533 CCDC65Q8IXS2 484 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 SPICE1Q8N0Z3 855 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 TAF4BQ92750 862 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 LRRC45Q96CN5 670 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 FAM167BQ9BTA0 163 aa14.19□□□□□ -0.14
CHD1L-210ENST00000622533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms