RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 DIS3Q9Y2L1 958 aaKnown RBP9.46□□□□□ -0.89
PDE6A-204ENST00000613228 USP17L15C9J2P7 530 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 USP17L13C9JLJ4 530 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 USP17L11C9JVI0 530 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 USP17L18D6R9N7 530 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 USP17L22D6RA61 530 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 USP17L17D6RBQ6 530 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 USP17L19D6RCP7 530 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 USP17L20D6RJB6 530 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 POLR2FP61218 127 aaKnown RBP9.46□□□□□ -0.89
PDE6A-204ENST00000613228 USP17L24Q0WX57 530 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 PNMA8AQ86V59 439 aaPredicted RBP9.46□□□□□ -0.89
PDE6A-204ENST00000613228 MAK16Q9BXY0 300 aaKnown RBP9.46□□□□□ -0.89
PDE6A-204ENST00000613228 ZNF277Q9NRM2 450 aaPredicted RBP9.46□□□□□ -0.89
PDE6A-204ENST00000613228 CEP72Q9P209 647 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 TRPC6Q9Y210 931 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 ALS2Q96Q42 1657 aa9.46□□□□□ -0.89
PDE6A-204ENST00000613228 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 SEC31AO94979 1220 aaKnown RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 P4HBP07237 508 aaKnown RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 DPYDQ12882 1025 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 STXBP2Q15833 593 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 GPR162Q16538 588 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 CAPRIN2Q6IMN6 1127 aaKnown RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 GRAMD1CQ8IYS0 662 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 ADPGKQ9BRR6 497 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 STIM2Q9P246 746 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 SEPT9Q9UHD8 586 aaPredicted RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 IKBKGQ9Y6K9 419 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 ROBO1Q9Y6N7 1651 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 GUCY1A2P33402 732 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 MAN1A1P33908 653 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 KIF22Q14807 665 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 PPP1R7Q15435 360 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 LONRF2Q1L5Z9 754 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 GSTA5Q7RTV2 222 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 SDCCAG8Q86SQ7 713 aaPredicted RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 STAG2Q8N3U4 1231 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 SREK1Q8WXA9 508 aaKnown RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 SPDL1Q96EA4 605 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 NT5C1BQ96P26 610 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 IQCGQ9H095 443 aaKnown RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 CCDC113Q9H0I3 377 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 NDST4Q9H3R1 872 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 PLCB1Q9NQ66 1216 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 LIMA1Q9UHB6 759 aaKnown RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 TRPM3Q9HCF6 1732 aaPredicted RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 XPOTO43592 962 aaKnown RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 TNNI1P19237 187 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 TROAPQ12815 778 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 INTS8Q75QN2 995 aaKnown RBP9.46□□□□□ -0.9
PDE6A-204ENST00000613228 EGFL6Q8IUX8 553 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 PPP1R12CQ9BZL4 782 aa9.46□□□□□ -0.9
PDE6A-204ENST00000613228 HMGB1P1B2RPK0 211 aaPredicted RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 CTNND1O60716 968 aaKnown RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 STAM2O75886 525 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 SNUPNO95149 360 aaKnown RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 EYA4O95677 639 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 H2AFZP0C0S5 128 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 SESN3P58005 492 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 COASYQ13057 564 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 MTMR1Q13613 665 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 ARHGEF6Q15052 776 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 H2AFVQ71UI9 128 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 RDM1Q8NG50 284 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 SLC4A9Q96Q91 983 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 SAMSN1Q9NSI8 373 aaKnown RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 TYW1Q9NV66 732 aaKnown RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 POLLQ9UGP5 575 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 ATF5Q9Y2D1 282 aaPredicted RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 FAN1Q9Y2M0 1017 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 CCDC151A5D8V7 595 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 APBA1Q02410 837 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 U2AF1L4Q8WU68 220 aaKnown RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 ATP6V0A4Q9HBG4 840 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 RHOBTB3O94955 611 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 ZFXP17010 805 aaPredicted RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 CORO7P57737 925 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 KYAT1Q16773 422 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 MAEAQ7L5Y9 396 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 FASTKD5Q7L8L6 764 aaKnown RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 GMCL1Q96IK5 515 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 OSBPL9Q96SU4 736 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 ACAD9Q9H845 621 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 AFDNP55196 1824 aaKnown RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 YARSP54577 528 aaKnown RBP9.45□□□□□ -0.9
PDE6A-204ENST00000613228 CYP4A11Q02928 519 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 PRKG1Q13976 671 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 VCPKMTQ9H867 229 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 CDC23Q9UJX2 597 aa9.45□□□□□ -0.9
PDE6A-204ENST00000613228 HSPA6P17066 643 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 MAP7D1Q3KQU3 841 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 SLC30A9Q6PML9 568 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 MIGA2Q7L4E1 593 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 METTL16Q86W50 562 aaKnown RBP9.44□□□□□ -0.9
PDE6A-204ENST00000613228 CACTINQ8WUQ7 758 aaKnown RBP9.44□□□□□ -0.9
PDE6A-204ENST00000613228 CEP170P1Q96L14 293 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 RAB3IPQ96QF0 476 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-204ENST00000613228 MAFGO15525 162 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms