RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 SLC26A2P50443 739 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 BTG3Q14201 252 aaPredicted RBP16.79■□□□□ 0.28
FDPS-221ENST00000612683 TCEAL5Q5H9L2 206 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 FAM160B1Q5W0V3 765 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 BLOC1S2Q6QNY1 142 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 MTHFD1LQ6UB35 978 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 RTN4RL1Q86UN2 441 aaPredicted RBP16.79■□□□□ 0.28
FDPS-221ENST00000612683 NME8Q8N427 588 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 KCNB2Q92953 911 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 BRF1Q92994 677 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 FTHL17Q9BXU8 183 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 C6orf50Q9HD87 102 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 RAPGEFL1Q9UHV5 662 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 PADI3Q9ULW8 664 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 RWDD3Q9Y3V2 267 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 TTC3P53804 2025 aa16.79■□□□□ 0.28
FDPS-221ENST00000612683 MYO7AQ13402 2215 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 ADGRA3Q8IWK6 1321 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 IGKV6D-21A0A0A0MT36 114 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 DGKIO75912 1065 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 CCNE2O96020 404 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 KRT76Q01546 638 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 AKAP17AQ02040 695 aaKnown RBP16.78■□□□□ 0.28
FDPS-221ENST00000612683 SWSAP1Q6NVH7 229 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 PDXDC2PQ6P474 469 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 ABHD15Q6UXT9 468 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 ZNF689Q96CS4 500 aaPredicted RBP16.78■□□□□ 0.28
FDPS-221ENST00000612683 ZMYND12Q9H0C1 365 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 NSUN3Q9H649 340 aaKnown RBP16.78■□□□□ 0.28
FDPS-221ENST00000612683 ZNF302Q9NR11 478 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 GINS2Q9Y248 185 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 SNX14Q9Y5W7 946 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 NLRC5Q86WI3 1866 aa16.78■□□□□ 0.28
FDPS-221ENST00000612683 C5orf67F2Z3F1 127 aa16.77■□□□□ 0.28
FDPS-221ENST00000612683 H3BQ06 376 aaPredicted RBP16.77■□□□□ 0.28
FDPS-221ENST00000612683 IPO5O00410 1097 aaKnown RBP16.77■□□□□ 0.28
FDPS-221ENST00000612683 DHX15O43143 795 aaKnown RBP16.77■□□□□ 0.28
FDPS-221ENST00000612683 PRPF3O43395 683 aaKnown RBP16.77■□□□□ 0.28
FDPS-221ENST00000612683 CYP3A4P08684 503 aa16.77■□□□□ 0.28
FDPS-221ENST00000612683 HSPA4P34932 840 aa16.77■□□□□ 0.28
FDPS-221ENST00000612683 NFX1Q12986 1120 aaKnown RBP16.77■□□□□ 0.28
FDPS-221ENST00000612683 PAK2Q13177 524 aa16.77■□□□□ 0.28
FDPS-221ENST00000612683 MCTP2Q6DN12 878 aa16.77■□□□□ 0.28
FDPS-221ENST00000612683 PTCRAQ6ISU1 281 aaPredicted RBP16.77■□□□□ 0.28
FDPS-221ENST00000612683 MIS18BP1Q6P0N0 1132 aa16.77■□□□□ 0.28
FDPS-221ENST00000612683 CKAP2LQ8IYA6 745 aa16.77■□□□□ 0.28
FDPS-221ENST00000612683 CCDC12Q8WUD4 166 aaPredicted RBP16.77■□□□□ 0.28
FDPS-221ENST00000612683 LINC01599Q8WXQ3 324 aa16.77■□□□□ 0.28
FDPS-221ENST00000612683 ZNF577Q9BSK1 485 aa16.77■□□□□ 0.28
FDPS-221ENST00000612683 C11orf84Q9BUA3 381 aaPredicted RBP16.77■□□□□ 0.28
FDPS-221ENST00000612683 LOXHD1Q8IVV2 1947 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 IGSF9BQ9UPX0 1349 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 IGLV3-22A0A075B6J6 115 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 ESYT2A0FGR8 921 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 ADAMTS3O15072 1205 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 GRM6O15303 877 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 STAG3L1P0CL83 205 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 IBSPP21815 317 aaPredicted RBP16.76■□□□□ 0.27
FDPS-221ENST00000612683 GNA11P29992 359 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 PKN1Q16512 942 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 TMEM266Q2M3C6 531 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 ZNF484Q5JVG2 852 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 TRMT1LQ7Z2T5 733 aaKnown RBP16.76■□□□□ 0.27
FDPS-221ENST00000612683 NPAS4Q8IUM7 802 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 CCDC60Q8IWA6 550 aaPredicted RBP16.76■□□□□ 0.27
FDPS-221ENST00000612683 FAM178BQ8IXR5 827 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 REXO1Q8N1G1 1221 aaKnown RBP16.76■□□□□ 0.27
FDPS-221ENST00000612683 ATP8B4Q8TF62 1192 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 CLP1Q92989 425 aaKnown RBP16.76■□□□□ 0.27
FDPS-221ENST00000612683 PHKBQ93100 1093 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 PABPC5Q96DU9 382 aaKnown RBP16.76■□□□□ 0.27
FDPS-221ENST00000612683 CCDC136Q96JN2 1154 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 LMAN2LQ9H0V9 348 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 RC3H2Q9HBD1 1191 aaKnown RBP16.76■□□□□ 0.27
FDPS-221ENST00000612683 CD320Q9NPF0 282 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 TBC1D22BQ9NU19 505 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 CLDND1Q9NY35 253 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 LRFN2Q9ULH4 789 aa16.76■□□□□ 0.27
FDPS-221ENST00000612683 KDM3AQ9Y4C1 1321 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 BDP1A6H8Y1 2624 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 GRXCR2A6NFK2 248 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 PPFIA3O75145 1194 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 CSPG5O95196 566 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 LINC00271P0C7V0 271 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 IL9P15248 144 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 RPS6KB1P23443 525 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 PSMA5P28066 241 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 PUS10Q3MIT2 529 aaKnown RBP16.75■□□□□ 0.27
FDPS-221ENST00000612683 PAN2Q504Q3 1202 aaKnown RBP16.75■□□□□ 0.27
FDPS-221ENST00000612683 KIAA0319LQ8IZA0 1049 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 GJD3Q8N144 294 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 NEK9Q8TD19 979 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 CRYGNQ8WXF5 182 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 KHSRPQ92945 711 aaKnown RBP eCLIP16.75■□□□□ 0.275e-9■□□□□ 9.8
FDPS-221ENST00000612683 CDHR5Q9HBB8 845 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 ALG13Q9NP73 1137 aaKnown RBP16.75■□□□□ 0.27
FDPS-221ENST00000612683 TCEAL9Q9UHQ7 104 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 RALGAPA2Q2PPJ7 1873 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 EVPLQ92817 2033 aa16.75■□□□□ 0.27
FDPS-221ENST00000612683 NCK2O43639 380 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms