RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 TRMT1LQ7Z2T5 733 aaKnown RBP15.24■□□□□ 0.03
HMGB1P24-201ENST00000611897 PADI3Q9ULW8 664 aa15.24■□□□□ 0.03
HMGB1P24-201ENST00000611897 POTEB3A0JP26 581 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 PRR33A8MZF0 331 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 MAFGO15525 162 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 LINC01565O15544 149 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 ZBTB43O43298 467 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 PPFIA3O75145 1194 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 TBX10O75333 385 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 DGKIO75912 1065 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 MMP1P03956 469 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 SCG2P13521 617 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 NDUFV1P49821 464 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 KRT76Q01546 638 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 ITGB3BPQ13352 177 aaPredicted RBP15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 SPOUT1Q5T280 376 aaKnown RBP15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 RNF20Q5VTR2 975 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 POTEBQ6S5H4 581 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 NPAS4Q8IUM7 802 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 CLP1Q92989 425 aaKnown RBP15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 RIC8AQ9NPQ8 531 aa15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 RBM28Q9NW13 759 aaKnown RBP15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 V9GY48 417 aaPredicted RBP15.23■□□□□ 0.03
HMGB1P24-201ENST00000611897 PIEZO1Q92508 2521 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 MYH9P35579 1960 aaKnown RBP15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 KLF18A0A0U1RQI7 1052 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 SMCO2A6NFE2 343 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 NCK2O43639 380 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 STAG3L1P0CL83 205 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 LTBRP36941 435 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 FGD1P98174 961 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 NECTIN1Q15223 517 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 CEP55Q53EZ4 464 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 JAKMIP3Q5VZ66 844 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 SGMS1Q86VZ5 419 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 ADHFE1Q8IWW8 467 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 CMTR2Q8IYT2 770 aaKnown RBP15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 KLHL23Q8NBE8 558 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 TNPO1Q92973 898 aaKnown RBP15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 PPP2R3CQ969Q6 453 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 ZNF689Q96CS4 500 aaPredicted RBP15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 NEK1Q96PY6 1258 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 FTHL17Q9BXU8 183 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 CELF4Q9BZC1 486 aaKnown RBP15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 AGO4Q9HCK5 861 aaKnown RBP15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 TCEAL9Q9UHQ7 104 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 PLAGL2Q9UPG8 496 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 PCDHA2Q9Y5H9 948 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 PLXNA4Q9HCM2 1894 aa15.22■□□□□ 0.03
HMGB1P24-201ENST00000611897 NFASCO94856 1347 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 IGSF9BQ9UPX0 1349 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 STXBP3O00186 592 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 MBTPS2O43462 519 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 FOSP01100 380 aaPredicted RBP15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 RPLP2P05387 115 aaKnown RBP15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 ITGB1P05556 798 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 KLRC1P26715 233 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 IRS1P35568 1242 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 FAM160B1Q5W0V3 765 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 PPP1R18Q6NYC8 613 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 MTHFD1LQ6UB35 978 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 ADGRD2Q7Z7M1 963 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 RBM23Q86U06 439 aaKnown RBP15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 RTN4RL1Q86UN2 441 aaPredicted RBP15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 PLA2G4DQ86XP0 818 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 CKAP2LQ8IYA6 745 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 PLVAPQ9BX97 442 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 CD207Q9UJ71 328 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 BRPF3Q9ULD4 1205 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 PCDHGC5Q9Y5F6 944 aa15.21■□□□□ 0.03
HMGB1P24-201ENST00000611897 SMIM35A0A1B0GVV1 85 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 DENND3A2RUS2 1198 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 CCNE2O96020 404 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 DNAJB1P25685 340 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 NRIP1P48552 1158 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 SMAD4Q13485 552 aaKnown RBP15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 COL19A1Q14993 1142 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 PDXDC2PQ6P474 469 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 PLPPR4Q7Z2D5 763 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 CCDC60Q8IWA6 550 aaPredicted RBP15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 POF1BQ8WVV4 589 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 TMX1Q9H3N1 280 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 PRKAG3Q9UGI9 489 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 MUTYHQ9UIF7 546 aa15.2■□□□□ 0.02
HMGB1P24-201ENST00000611897 TRIOO75962 3097 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 FNDC1Q4ZHG4 1894 aaPredicted RBP15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 TBKBP1A7MCY6 615 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 HBP1O60381 514 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 RPS6KA5O75582 802 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 SREBF1P36956 1147 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 AP3B2Q13367 1082 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 CAMK1Q14012 370 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 SMAD2Q15796 467 aaKnown RBP15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 CTC1Q2NKJ3 1217 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 ADCK5Q3MIX3 580 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 SPPL3Q8TCT6 385 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 MICAL1Q8TDZ2 1067 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 P2RX5Q93086 422 aa15.19■□□□□ 0.02
HMGB1P24-201ENST00000611897 POP1Q99575 1024 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms