RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 FIGNQ5HY92 759 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 SH3D19Q5HYK7 790 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 ZNF697Q5TEC3 545 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 GALNT17Q6IS24 598 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 EMBQ6PCB8 327 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 CCNI2Q6ZMN8 369 aaPredicted RBP8.4□□□□□ -1.06
LMBR1-221ENST00000609774 CCDC91Q7Z6B0 441 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 TADA2BQ86TJ2 420 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 LAPTM4BQ86VI4 370 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 MMGT1Q8N4V1 131 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 RASSF8Q8NHQ8 419 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 SMCR8Q8TEV9 937 aaPredicted RBP8.4□□□□□ -1.06
LMBR1-221ENST00000609774 TRIB2Q92519 343 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 USP6NLQ92738 828 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 SECISBP2LQ93073 1101 aaKnown RBP8.4□□□□□ -1.06
LMBR1-221ENST00000609774 ZSCAN10Q96SZ4 725 aaPredicted RBP8.4□□□□□ -1.06
LMBR1-221ENST00000609774 TACO1Q9BSH4 297 aaKnown RBP8.4□□□□□ -1.06
LMBR1-221ENST00000609774 SEMA6BQ9H3T3 888 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 ARMT1Q9H993 441 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 SH3GLB2Q9NR46 395 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 EXOC1Q9NV70 894 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 TAB2Q9NYJ8 693 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 LRP2BPQ9P2M1 347 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 JRKLQ9Y4A0 524 aa8.4□□□□□ -1.06
LMBR1-221ENST00000609774 PRUNE2Q8WUY3 3088 aa8.4□□□□□ -1.07
LMBR1-221ENST00000609774 MYH8P13535 1937 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 RLFQ13129 1914 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 MYH2Q9UKX2 1941 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 GAKO14976 1311 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 TNKSO95271 1327 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 MAGEB6P1A0A0J9YX57 407 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 LRRIQ3A6PVS8 624 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-221ENST00000609774 VGLL3A8MV65 326 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 PES1O00541 588 aaKnown RBP8.39□□□□□ -1.07
LMBR1-221ENST00000609774 ERLIN2O94905 339 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 EPB41P11171 864 aaKnown RBP8.39□□□□□ -1.07
LMBR1-221ENST00000609774 IDEP14735 1019 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 TNFRSF8P28908 595 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 GUCY1A2P33402 732 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 PHKA1P46020 1223 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 GNAQP50148 359 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 EPHB4P54760 987 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 NLRP5P59047 1200 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 SMAD3P84022 425 aaKnown RBP8.39□□□□□ -1.07
LMBR1-221ENST00000609774 GRIN1Q05586 938 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 PTGDRQ13258 359 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 MEA1Q16626 185 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 PTPN21Q16825 1174 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 LRRC26Q2I0M4 334 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 CCDC181Q5TID7 509 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 PDXDC2PQ6P474 469 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 MMS22LQ6ZRQ5 1243 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 ZNF572Q7Z3I7 529 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-221ENST00000609774 RPAINQ86UA6 219 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 ADSSL1Q8N142 457 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 ANKRD13CQ8N6S4 541 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 MAFAQ8NHW3 353 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-221ENST00000609774 SOCS4Q8WXH5 440 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.39□□□□□ -1.07
LMBR1-221ENST00000609774 EPSTI1Q96J88 318 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 PCMTD1Q96MG8 357 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-221ENST00000609774 MED15Q96RN5 788 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 CEP89Q96ST8 783 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 CAPS2Q9BXY5 557 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 SENP2Q9HC62 589 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 EPB41L4AQ9HCS5 686 aaPredicted RBP8.39□□□□□ -1.07
LMBR1-221ENST00000609774 PICK1Q9NRD5 415 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 GEMIN8Q9NWZ8 242 aaKnown RBP8.39□□□□□ -1.07
LMBR1-221ENST00000609774 EYSQ5T1H1 3165 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 BDP1A6H8Y1 2624 aa8.39□□□□□ -1.07
LMBR1-221ENST00000609774 SRRM3A6NNA2 597 aaPredicted RBP8.38□□□□□ -1.07
LMBR1-221ENST00000609774 TRIM66O15016 1216 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 PHACTR2O75167 634 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 PRPF6O94906 941 aaKnown RBP8.38□□□□□ -1.07
LMBR1-221ENST00000609774 SYF2O95926 243 aaKnown RBP8.38□□□□□ -1.07
LMBR1-221ENST00000609774 IGHA2P01877 340 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 TRIM21P19474 475 aaKnown RBP8.38□□□□□ -1.07
LMBR1-221ENST00000609774 GUCY2CP25092 1073 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 PLA2G5P39877 138 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 VAV2P52735 878 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 PABPC4Q13310 644 aaKnown RBP eCLIP8.38□□□□□ -1.07
LMBR1-221ENST00000609774 SEC23AQ15436 765 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 ZNF174Q15697 407 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 E2F4Q16254 413 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 NCAPH2Q6IBW4 605 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 PI16Q6UXB8 463 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 DTHD1Q6ZMT9 781 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 SH3BP5LQ7L8J4 393 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 CCDC84Q86UT8 332 aaPredicted RBP8.38□□□□□ -1.07
LMBR1-221ENST00000609774 NOA1Q8NC60 698 aaKnown RBP8.38□□□□□ -1.07
LMBR1-221ENST00000609774 CCDC42Q96M95 316 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 AK8Q96MA6 479 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 EPAS1Q99814 870 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 SELENOOQ9BVL4 669 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 EDEM3Q9BZQ6 932 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 LRRC27Q9C0I9 530 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 NUCKS1Q9H1E3 243 aaKnown RBP8.38□□□□□ -1.07
LMBR1-221ENST00000609774 JADE2Q9NQC1 790 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 VPS54Q9P1Q0 977 aa8.38□□□□□ -1.07
LMBR1-221ENST00000609774 LCMT1Q9UIC8 334 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms