RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 PROX2Q3B8N5 592 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 CCDC122Q5T0U0 273 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 FOXR1Q6PIV2 292 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 KRT26Q7Z3Y9 468 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 LRRC49Q8IUZ0 686 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 SLC22A8Q8TCC7 542 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 ABTB1Q969K4 478 aaPredicted RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 RBM41Q96IZ5 413 aaKnown RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 RUNDC3BQ96NL0 473 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 FUCA2Q9BTY2 467 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 TRPV5Q9NQA5 729 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 PIH1D1Q9NWS0 290 aaKnown RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 TSC22D4Q9Y3Q8 395 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 ADGRF5Q8IZF2 1346 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 SPDYE3A6NKU9 549 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 ATF7P17544 494 aaPredicted RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 SYT1P21579 422 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 MCM3P25205 808 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 EIF4A3P38919 411 aaKnown RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 PMS2P54278 862 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 STK38Q15208 465 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 PUM3Q15397 648 aaKnown RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 EMC10Q5UCC4 262 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 CDCA2Q69YH5 1023 aaPredicted RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 CFAP161Q6P656 301 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 PRR23CQ6ZRP0 262 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 BPHLQ86WA6 291 aaPredicted RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 PALB2Q86YC2 1186 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 ANKK1Q8NFD2 765 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 TSNARE1Q96NA8 513 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 RBM14Q96PK6 669 aaKnown RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 CSRNP1Q96S65 589 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 CAAP1Q9H8G2 361 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 CBX8Q9HC52 389 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 A6NJY4 79 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 CCDC169A6NNP5 214 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 COL9A3Q14050 684 aaPredicted RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 HLTFQ14527 1009 aaKnown RBP eCLIP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 SEMA3AQ14563 771 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 SMAD1Q15797 465 aaKnown RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 NBPF14Q5TI25 921 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 GRAMD2AQ8IUY3 354 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 ETFBKMTQ8IXQ9 262 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 NECAB1Q8N987 351 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 C8orf58Q8NAV2 365 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 MDM1Q8TC05 714 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 DDI1Q8WTU0 396 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 POF1BQ8WVV4 589 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 KIFC2Q96AC6 838 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 MFSD3Q96ES6 412 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 BARD1Q99728 777 aaKnown RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 EDEM3Q9BZQ6 932 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 CEP72Q9P209 647 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 NOS1P29475 1434 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 ALG1L2C9J202 215 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 PRRT4C9JH25 899 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 KIF2AO00139 706 aaPredicted RBP7.77□□□□□ -1.17
TUBE1-207ENST00000604689 GJB6O95452 261 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 COL6A1P12109 1028 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 NPR3P17342 541 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 USP46P62068 366 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 CEBPZQ03701 1054 aaKnown RBP7.77□□□□□ -1.17
TUBE1-207ENST00000604689 MST1RQ04912 1400 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 PERM1Q5SV97 790 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 GPATCH4Q5T3I0 446 aaKnown RBP7.77□□□□□ -1.17
TUBE1-207ENST00000604689 FAM102BQ5T8I3 360 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 SH3PXD2AQ5TCZ1 1133 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 CARMIL2Q6F5E8 1435 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 PDXDC2PQ6P474 469 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 C6orf15Q6UXA7 325 aaPredicted RBP7.77□□□□□ -1.17
TUBE1-207ENST00000604689 BTNL9Q6UXG8 535 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 RAB11FIP4Q86YS3 637 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 CCDC83Q8IWF9 413 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 SMC1BQ8NDV3 1235 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 BRSK1Q8TDC3 778 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 NUDT16Q96DE0 195 aaKnown RBP7.77□□□□□ -1.17
TUBE1-207ENST00000604689 PGBD4Q96DM1 585 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 SHDQ96IW2 340 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 CCSER1Q9C0I3 900 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 PLEKHA5Q9HAU0 1116 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 HOMER3Q9NSC5 361 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 RRN3Q9NYV6 651 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 USP20Q9Y2K6 914 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 FHOD1Q9Y613 1164 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 PLEKHG2Q9H7P9 1386 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 A0A087WUV0 522 aaPredicted RBP7.77□□□□□ -1.17
TUBE1-207ENST00000604689 MTSS1O43312 755 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 SOX5P35711 763 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 MLH1P40692 756 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 TYRO3Q06418 890 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 TAF7Q15545 349 aaPredicted RBP7.77□□□□□ -1.17
TUBE1-207ENST00000604689 ARHGAP29Q52LW3 1261 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 ISLR2Q6UXK2 745 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 TTC39CQ8N584 583 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 PHACTR3Q96KR7 559 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 NLRP4Q96MN2 994 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 MEIS3Q99687 375 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 ATP13A3Q9H7F0 1226 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 DBNDD1Q9H9R9 158 aa7.77□□□□□ -1.17
TUBE1-207ENST00000604689 NPHS2Q9NP85 383 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms