RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 POTEBQ6S5H4 581 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 CCDC60Q8IWA6 550 aaPredicted RBP13.74□□□□□ -0.21
TGFB1-204ENST00000600196 TPH2Q8IWU9 490 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 SLC43A3Q8NBI5 491 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 MRPS27Q92552 414 aaKnown RBP13.74□□□□□ -0.21
TGFB1-204ENST00000600196 SYMPKQ92797 1274 aaKnown RBP13.74□□□□□ -0.21
TGFB1-204ENST00000600196 KAT2BQ92831 832 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 GJA10Q969M2 543 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 DYDC2Q96IM9 177 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 TIGD1Q96MW7 591 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 LXNQ9BS40 222 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 KCNH3Q9ULD8 1083 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 TCHHQ07283 1943 aa13.74□□□□□ -0.21
TGFB1-204ENST00000600196 DDX11L8A8MPP1 907 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 STBD1O95210 358 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 EYA4O95677 639 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 MYL3P08590 195 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 COL6A1P12109 1028 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 HOXC8P31273 242 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 RFC5P40937 340 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 PSEN2P49810 448 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 AMPD3Q01432 767 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 MFSD10Q14728 455 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 TARBP2Q15633 366 aaKnown RBP13.73□□□□□ -0.21
TGFB1-204ENST00000600196 RRAGBQ5VZM2 374 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 EPSTI1Q96J88 318 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 CLIC6Q96NY7 704 aa13.73□□□□□ -0.21
TGFB1-204ENST00000600196 MROH7Q68CQ1 1323 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 A0A0U1RQG5 324 aaPredicted RBP13.72□□□□□ -0.21
TGFB1-204ENST00000600196 MED24O75448 989 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 ATP4AP20648 1035 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 SCP2P22307 547 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 YWHABP31946 246 aaKnown RBP13.72□□□□□ -0.21
TGFB1-204ENST00000600196 BEX3Q00994 111 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 SP4Q02446 784 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 GRIN1Q05586 938 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 FAM160A1Q05DH4 1040 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 GRB10Q13322 594 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 KIAA0753Q2KHM9 967 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 UTP14CQ5TAP6 766 aaKnown RBP13.72□□□□□ -0.21
TGFB1-204ENST00000600196 CNNM4Q6P4Q7 775 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 RPAINQ86UA6 219 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 SYT2Q8N9I0 419 aaPredicted RBP13.72□□□□□ -0.21
TGFB1-204ENST00000600196 TOX2Q96NM4 488 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 RGL1Q9NZL6 768 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 KIAA1024Q9UPX6 916 aa13.72□□□□□ -0.21
TGFB1-204ENST00000600196 HTTP42858 3142 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 MBLAC1A4D2B0 266 aaPredicted RBP13.71□□□□□ -0.21
TGFB1-204ENST00000600196 MYADML2A6NDP7 307 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 ZNF862O60290 1169 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 DGAT1O75907 488 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 SLFN14P0C7P3 912 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 SYKP43405 635 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 CDK7P50613 346 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 PRKCEQ02156 737 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 ITGA7Q13683 1181 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 CTTNQ14247 550 aaKnown RBP13.71□□□□□ -0.21
TGFB1-204ENST00000600196 SNX17Q15036 470 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 NECAB2Q7Z6G3 386 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 CKAP2LQ8IYA6 745 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 NME8Q8N427 588 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 C7orf31Q8N865 590 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 RETREG2Q8NC44 543 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 BANK1Q8NDB2 785 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 RASSF8Q8NHQ8 419 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 LENG1Q96BZ8 264 aaPredicted RBP13.71□□□□□ -0.21
TGFB1-204ENST00000600196 PNMA5Q96PV4 448 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 C17orf75Q9HAS0 396 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 STARD7Q9NQZ5 370 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 CYP26B1Q9NR63 512 aa13.71□□□□□ -0.21
TGFB1-204ENST00000600196 BMP2KQ9NSY1 1161 aaPredicted RBP13.71□□□□□ -0.21
TGFB1-204ENST00000600196 DDX19AQ9NUU7 478 aaKnown RBP13.71□□□□□ -0.21
TGFB1-204ENST00000600196 HOOK1Q9UJC3 728 aaKnown RBP13.71□□□□□ -0.21
TGFB1-204ENST00000600196 SCN10AQ9Y5Y9 1956 aa13.71□□□□□ -0.22
TGFB1-204ENST00000600196 IGKV6-21A0A0C4DH24 114 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 A0A1W2PQ45 241 aaPredicted RBP13.7□□□□□ -0.22
TGFB1-204ENST00000600196 A0A1W2PQY0 241 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 ARVCFO00192 962 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 ASAP2O43150 1006 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 CAND2O75155 1236 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 PRPF40AO75400 957 aaKnown RBP13.7□□□□□ -0.22
TGFB1-204ENST00000600196 MBD3O95983 291 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 PFKFB1P16118 471 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 MCM4P33991 863 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 RARRES1P49788 294 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
TGFB1-204ENST00000600196 ADAM17P78536 824 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 CYP4A11Q02928 519 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 E2F4Q16254 413 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 TAF2Q6P1X5 1199 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 CXCL17Q6UXB2 119 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 ANO5Q75V66 913 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 SV2BQ7L1I2 683 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 UBE2Q1Q7Z7E8 422 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 MCPH1Q8NEM0 835 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 ENGASEQ8NFI3 743 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 RAD54LQ92698 747 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 ABHD8Q96I13 439 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 CEP89Q96ST8 783 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms