RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 BMP8AQ7Z5Y6 402 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 CYP2W1Q8TAV3 490 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 TRAPPC12Q8WVT3 735 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 POF1BQ8WVV4 589 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 PPP2R3CQ969Q6 453 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 TMEM87BQ96K49 555 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 MFSD14AQ96MC6 490 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 CELF4Q9BZC1 486 aaKnown RBP11.42□□□□□ -0.58
LIG1-209ENST00000596104 KCNH7Q9NS40 1196 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 SLC9A2Q9UBY0 812 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 PCDHGC5Q9Y5F6 944 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 ZNF318Q5VUA4 2279 aa11.42□□□□□ -0.58
LIG1-209ENST00000596104 NFASCO94856 1347 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 NLRC5Q86WI3 1866 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 SMIM35A0A1B0GVV1 85 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 LOC730098B7Z3J9 87 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 STAG3L1P0CL83 205 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 MCM5P33992 734 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 LIFRP42702 1097 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 NRIP1P48552 1158 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 ACTR2P61160 394 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 PAK2Q13177 524 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 CBX2Q14781 532 aaPredicted RBP11.41□□□□□ -0.58
LIG1-209ENST00000596104 NFXL1Q6ZNB6 911 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 TMTC3Q6ZXV5 915 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 PLPPR4Q7Z2D5 763 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 RAB11FIP4Q86YS3 637 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 TMTC2Q8N394 836 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 MXRA8Q9BRK3 442 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 AZI2Q9H6S1 392 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 TECTAO75443 2155 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 ATG2AQ2TAZ0 1938 aa11.41□□□□□ -0.58
LIG1-209ENST00000596104 DOCK5Q9H7D0 1870 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 IGKV6D-21A0A0A0MT36 114 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 CCDC69A6NI79 296 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 M0QZ92 97 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 MGEA5O60502 916 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 ATG7O95352 703 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 CALM1P0DP23 149 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 CALM2P0DP24 149 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 CALM3P0DP25 149 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 ARP10275 920 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 SARSP49591 514 aaKnown RBP11.4□□□□□ -0.58
LIG1-209ENST00000596104 STAT5BP51692 787 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 KRT76Q01546 638 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 ITGB3BPQ13352 177 aaPredicted RBP11.4□□□□□ -0.58
LIG1-209ENST00000596104 TMEM266Q2M3C6 531 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 TYW1BQ6NUM6 668 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 TRIM67Q6ZTA4 783 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 NME8Q8N427 588 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 CCDC82Q8N4S0 544 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 PRSS33Q8NF86 280 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 TNPO1Q92973 898 aaKnown RBP11.4□□□□□ -0.58
LIG1-209ENST00000596104 ERVK-5Q9HDB9 667 aa11.4□□□□□ -0.58
LIG1-209ENST00000596104 BARX2Q9UMQ3 279 aaPredicted RBP11.4□□□□□ -0.58
LIG1-209ENST00000596104 USP15Q9Y4E8 981 aaPredicted RBP11.4□□□□□ -0.58
LIG1-209ENST00000596104 TMEM221A6NGB7 291 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 M0R296 226 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 SLC27A2O14975 620 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 CCNE2O96020 404 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 UBE3AQ05086 875 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 CEP55Q53EZ4 464 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 IER5LQ5T953 404 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 WWC2Q6AWC2 1192 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 MTHFD1LQ6UB35 978 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 FAM43BQ6ZT52 329 aaPredicted RBP11.39□□□□□ -0.59
LIG1-209ENST00000596104 HEATR3Q7Z4Q2 680 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 RBM23Q86U06 439 aaKnown RBP11.39□□□□□ -0.59
LIG1-209ENST00000596104 SGMS1Q86VZ5 419 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 TEX2Q8IWB9 1127 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 FANCBQ8NB91 859 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 VN1R2Q8NFZ6 395 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 ATP8B4Q8TF62 1192 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 TMEM40Q8WWA1 233 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 PGBD1Q96JS3 809 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 PHOX2BQ99453 314 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 SDF4Q9BRK5 362 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 LSG1Q9H089 658 aaKnown RBP11.39□□□□□ -0.59
LIG1-209ENST00000596104 CDHR5Q9HBB8 845 aa11.39□□□□□ -0.59
LIG1-209ENST00000596104 AGO4Q9HCK5 861 aaKnown RBP11.39□□□□□ -0.59
LIG1-209ENST00000596104 NOC2LQ9Y3T9 749 aaKnown RBP11.39□□□□□ -0.59
LIG1-209ENST00000596104 CNTNAP5Q8WYK1 1306 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 C9IYK1 514 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 MEIS1O00470 390 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 HBP1O60381 514 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 KLRC1P26715 233 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 SLC26A2P50443 739 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 ZXDAP98168 799 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 RBM10P98175 930 aaKnown RBP11.38□□□□□ -0.59
LIG1-209ENST00000596104 FUT2Q10981 343 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 NFX1Q12986 1120 aaKnown RBP11.38□□□□□ -0.59
LIG1-209ENST00000596104 DUSP6Q16828 381 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 KIAA0319LQ8IZA0 1049 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 SUSD6Q92537 303 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 PHF7Q9BWX1 381 aaPredicted RBP11.38□□□□□ -0.59
LIG1-209ENST00000596104 LRRC2Q9BYS8 371 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 ANO3Q9BYT9 981 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 TLE6Q9H808 572 aa11.38□□□□□ -0.59
LIG1-209ENST00000596104 RIC8AQ9NPQ8 531 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms