RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 NSUN3Q9H649 340 aaKnown RBP23.31■■□□□ 1.32
TRIM47-207ENST00000593089 RC3H2Q9HBD1 1191 aaKnown RBP23.31■■□□□ 1.32
TRIM47-207ENST00000593089 ATG2AQ2TAZ0 1938 aa23.31■■□□□ 1.32
TRIM47-207ENST00000593089 FAM86B1E9PN63 330 aa23.3■■□□□ 1.32
TRIM47-207ENST00000593089 FAM86B2P0C5J1 330 aa23.3■■□□□ 1.32
TRIM47-207ENST00000593089 LINC00271P0C7V0 271 aa23.3■■□□□ 1.32
TRIM47-207ENST00000593089 SCG2P13521 617 aa23.3■■□□□ 1.32
TRIM47-207ENST00000593089 BMPR1AP36894 532 aa23.3■■□□□ 1.32
TRIM47-207ENST00000593089 MTHFD1LQ6UB35 978 aa23.3■■□□□ 1.32
TRIM47-207ENST00000593089 NIPA1Q7RTP0 329 aa23.3■■□□□ 1.32
TRIM47-207ENST00000593089 BRF1Q92994 677 aa23.3■■□□□ 1.32
TRIM47-207ENST00000593089 ZNF689Q96CS4 500 aaPredicted RBP23.3■■□□□ 1.32
TRIM47-207ENST00000593089 CELF4Q9BZC1 486 aaKnown RBP23.3■■□□□ 1.32
TRIM47-207ENST00000593089 RWDD3Q9Y3V2 267 aa23.3■■□□□ 1.32
TRIM47-207ENST00000593089 IGKV6D-21A0A0A0MT36 114 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 CCDC196A0A1B0GTZ2 297 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 SMIM35A0A1B0GVV1 85 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 C5orf67F2Z3F1 127 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 H3BQ06 376 aaPredicted RBP23.29■■□□□ 1.32
TRIM47-207ENST00000593089 ADAMTS3O15072 1205 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 DGKIO75912 1065 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 RB1P06400 928 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 IL9P15248 144 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 SLC26A2P50443 739 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 PAK2Q13177 524 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 FAM160B1Q5W0V3 765 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 PTCRAQ6ISU1 281 aaPredicted RBP23.29■■□□□ 1.32
TRIM47-207ENST00000593089 ABHD15Q6UXT9 468 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 RTN4RL1Q86UN2 441 aaPredicted RBP23.29■■□□□ 1.32
TRIM47-207ENST00000593089 KHSRPQ92945 711 aaKnown RBP eCLIP23.29■■□□□ 1.32
TRIM47-207ENST00000593089 C11orf84Q9BUA3 381 aaPredicted RBP23.29■■□□□ 1.32
TRIM47-207ENST00000593089 FTHL17Q9BXU8 183 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 CD320Q9NPF0 282 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 PADI3Q9ULW8 664 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 SNX14Q9Y5W7 946 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 SQORQ9Y6N5 450 aa23.29■■□□□ 1.32
TRIM47-207ENST00000593089 IGLV3-22A0A075B6J6 115 aa23.28■■□□□ 1.32
TRIM47-207ENST00000593089 GRM6O15303 877 aa23.28■■□□□ 1.32
TRIM47-207ENST00000593089 KLRC1P26715 233 aa23.28■■□□□ 1.32
TRIM47-207ENST00000593089 KRT76Q01546 638 aa23.28■■□□□ 1.32
TRIM47-207ENST00000593089 BLOC1S2Q6QNY1 142 aa23.28■■□□□ 1.32
TRIM47-207ENST00000593089 CCDC60Q8IWA6 550 aaPredicted RBP23.28■■□□□ 1.32
TRIM47-207ENST00000593089 KCNB2Q92953 911 aa23.28■■□□□ 1.32
TRIM47-207ENST00000593089 C6orf50Q9HD87 102 aa23.28■■□□□ 1.32
TRIM47-207ENST00000593089 ZNF302Q9NR11 478 aa23.28■■□□□ 1.32
TRIM47-207ENST00000593089 IGSF9BQ9UPX0 1349 aa23.28■■□□□ 1.32
TRIM47-207ENST00000593089 DHX15O43143 795 aaKnown RBP23.27■■□□□ 1.32
TRIM47-207ENST00000593089 HBP1O60381 514 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 CSPG5O95196 566 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 CYP3A4P08684 503 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 HSPA4P34932 840 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 SWSAP1Q6NVH7 229 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 MIS18BP1Q6P0N0 1132 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 FAM178BQ8IXR5 827 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 NME8Q8N427 588 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 NEK9Q8TD19 979 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 ATP8B4Q8TF62 1192 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 CRYGNQ8WXF5 182 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 CLP1Q92989 425 aaKnown RBP23.27■■□□□ 1.32
TRIM47-207ENST00000593089 PABPC5Q96DU9 382 aaKnown RBP23.27■■□□□ 1.32
TRIM47-207ENST00000593089 ZMYND12Q9H0C1 365 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 GINS2Q9Y248 185 aa23.27■■□□□ 1.32
TRIM47-207ENST00000593089 KIAA1671Q9BY89 1806 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 ESYT2A0FGR8 921 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 IPO5O00410 1097 aaKnown RBP23.26■■□□□ 1.31
TRIM47-207ENST00000593089 PPFIA3O75145 1194 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 IBSPP21815 317 aaPredicted RBP23.26■■□□□ 1.31
TRIM47-207ENST00000593089 PKN1Q16512 942 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 TMEM266Q2M3C6 531 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 PDXDC2PQ6P474 469 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 NPAS4Q8IUM7 802 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 REXO1Q8N1G1 1221 aaKnown RBP23.26■■□□□ 1.31
TRIM47-207ENST00000593089 CCDC12Q8WUD4 166 aaPredicted RBP23.26■■□□□ 1.31
TRIM47-207ENST00000593089 PHKBQ93100 1093 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 ZNF577Q9BSK1 485 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 LMAN2LQ9H0V9 348 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 CLDND1Q9NY35 253 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 KDM3AQ9Y4C1 1321 aa23.26■■□□□ 1.31
TRIM47-207ENST00000593089 EVPLQ92817 2033 aa23.25■■□□□ 1.31
TRIM47-207ENST00000593089 GRXCR2A6NFK2 248 aa23.25■■□□□ 1.31
TRIM47-207ENST00000593089 PRPF3O43395 683 aaKnown RBP23.25■■□□□ 1.31
TRIM47-207ENST00000593089 NFX1Q12986 1120 aaKnown RBP23.25■■□□□ 1.31
TRIM47-207ENST00000593089 PAN2Q504Q3 1202 aaKnown RBP23.25■■□□□ 1.31
TRIM47-207ENST00000593089 MRPL42Q9Y6G3 142 aaKnown RBP23.25■■□□□ 1.31
TRIM47-207ENST00000593089 MYO7AQ13402 2215 aa23.25■■□□□ 1.31
TRIM47-207ENST00000593089 COL1A2P08123 1366 aa23.25■■□□□ 1.31
TRIM47-207ENST00000593089 NID2Q14112 1375 aa23.25■■□□□ 1.31
TRIM47-207ENST00000593089 STAG3L1P0CL83 205 aa23.24■■□□□ 1.31
TRIM47-207ENST00000593089 RPS6KB1P23443 525 aa23.24■■□□□ 1.31
TRIM47-207ENST00000593089 SSTR3P32745 418 aaPredicted RBP23.24■■□□□ 1.31
TRIM47-207ENST00000593089 SETQ01105 290 aaPredicted RBP23.24■■□□□ 1.31
TRIM47-207ENST00000593089 AKAP17AQ02040 695 aaKnown RBP23.24■■□□□ 1.31
TRIM47-207ENST00000593089 PUS10Q3MIT2 529 aaKnown RBP23.24■■□□□ 1.31
TRIM47-207ENST00000593089 MCTP2Q6DN12 878 aa23.24■■□□□ 1.31
TRIM47-207ENST00000593089 TRMT1LQ7Z2T5 733 aaKnown RBP23.24■■□□□ 1.31
TRIM47-207ENST00000593089 CKAP2LQ8IYA6 745 aa23.24■■□□□ 1.31
TRIM47-207ENST00000593089 CMTR2Q8IYT2 770 aaKnown RBP23.24■■□□□ 1.31
TRIM47-207ENST00000593089 GJD3Q8N144 294 aa23.24■■□□□ 1.31
TRIM47-207ENST00000593089 CRIPAKQ8N1N5 446 aa23.24■■□□□ 1.31
TRIM47-207ENST00000593089 RASGRP4Q8TDF6 673 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms