RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 EP400NLQ6ZTU2 488 aa21.08■□□□□ 0.97
CCDC43-204ENST00000588687 MICU3Q86XE3 530 aa21.08■□□□□ 0.97
CCDC43-204ENST00000588687 NPAS4Q8IUM7 802 aa21.08■□□□□ 0.97
CCDC43-204ENST00000588687 ESYT1Q9BSJ8 1104 aa21.08■□□□□ 0.97
CCDC43-204ENST00000588687 TMX1Q9H3N1 280 aa21.08■□□□□ 0.97
CCDC43-204ENST00000588687 ALG13Q9NP73 1137 aaKnown RBP21.08■□□□□ 0.97
CCDC43-204ENST00000588687 PADI3Q9ULW8 664 aa21.08■□□□□ 0.97
CCDC43-204ENST00000588687 PCDHA2Q9Y5H9 948 aa21.08■□□□□ 0.97
CCDC43-204ENST00000588687 SLC12A7Q9Y666 1083 aa21.08■□□□□ 0.97
CCDC43-204ENST00000588687 ITGB1P05556 798 aa21.07■□□□□ 0.96
CCDC43-204ENST00000588687 ARP10275 920 aa21.07■□□□□ 0.96
CCDC43-204ENST00000588687 TMEM62Q0P6H9 643 aa21.07■□□□□ 0.96
CCDC43-204ENST00000588687 SMAD4Q13485 552 aaKnown RBP21.07■□□□□ 0.96
CCDC43-204ENST00000588687 CLUL1Q15846 466 aa21.07■□□□□ 0.96
CCDC43-204ENST00000588687 APOA5Q6Q788 366 aa21.07■□□□□ 0.96
CCDC43-204ENST00000588687 PLPPR4Q7Z2D5 763 aa21.07■□□□□ 0.96
CCDC43-204ENST00000588687 PGBD1Q96JS3 809 aa21.07■□□□□ 0.96
CCDC43-204ENST00000588687 MSLNLQ96KJ4 702 aa21.07■□□□□ 0.96
CCDC43-204ENST00000588687 FTHL17Q9BXU8 183 aa21.07■□□□□ 0.96
CCDC43-204ENST00000588687 USP34Q70CQ2 3546 aa21.07■□□□□ 0.96
CCDC43-204ENST00000588687 IGKV6D-21A0A0A0MT36 114 aa21.06■□□□□ 0.96
CCDC43-204ENST00000588687 ATG7O95352 703 aa21.06■□□□□ 0.96
CCDC43-204ENST00000588687 ADAM15Q13444 863 aa21.06■□□□□ 0.96
CCDC43-204ENST00000588687 IER5Q5VY09 327 aa21.06■□□□□ 0.96
CCDC43-204ENST00000588687 PPP1R18Q6NYC8 613 aa21.06■□□□□ 0.96
CCDC43-204ENST00000588687 ADGRD2Q7Z7M1 963 aa21.06■□□□□ 0.96
CCDC43-204ENST00000588687 TEX2Q8IWB9 1127 aa21.06■□□□□ 0.96
CCDC43-204ENST00000588687 SPPL3Q8TCT6 385 aa21.06■□□□□ 0.96
CCDC43-204ENST00000588687 AGO4Q9HCK5 861 aaKnown RBP21.06■□□□□ 0.96
CCDC43-204ENST00000588687 RIC8AQ9NPQ8 531 aa21.06■□□□□ 0.96
CCDC43-204ENST00000588687 TRPC6Q9Y210 931 aa21.06■□□□□ 0.96
CCDC43-204ENST00000588687 SMIM35A0A1B0GVV1 85 aa21.05■□□□□ 0.96
CCDC43-204ENST00000588687 CSPG5O95196 566 aa21.05■□□□□ 0.96
CCDC43-204ENST00000588687 CCNE2O96020 404 aa21.05■□□□□ 0.96
CCDC43-204ENST00000588687 CLK2P49760 499 aaKnown RBP21.05■□□□□ 0.96
CCDC43-204ENST00000588687 GATMP50440 423 aa21.05■□□□□ 0.96
CCDC43-204ENST00000588687 CEP55Q53EZ4 464 aa21.05■□□□□ 0.96
CCDC43-204ENST00000588687 ANO3Q9BYT9 981 aa21.05■□□□□ 0.96
CCDC43-204ENST00000588687 CELF4Q9BZC1 486 aaKnown RBP21.05■□□□□ 0.96
CCDC43-204ENST00000588687 AZI2Q9H6S1 392 aa21.05■□□□□ 0.96
CCDC43-204ENST00000588687 STXBP3O00186 592 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 MEIS1O00470 390 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 MGEA5O60502 916 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 EYA4O95677 639 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 GLP2RO95838 553 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 SCG2P13521 617 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 SREBF1P36956 1147 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 STAT5BP51692 787 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 PAK2Q13177 524 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 NAALADL2Q58DX5 795 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 MTHFD1LQ6UB35 978 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 KLHL23Q8NBE8 558 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 CLEC1BQ9P126 229 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 BRPF3Q9ULD4 1205 aa21.04■□□□□ 0.96
CCDC43-204ENST00000588687 ZBTB42B2RXF5 422 aa21.03■□□□□ 0.96
CCDC43-204ENST00000588687 NAPAP54920 295 aa21.03■□□□□ 0.96
CCDC43-204ENST00000588687 IRX6P78412 446 aaPredicted RBP21.03■□□□□ 0.96
CCDC43-204ENST00000588687 PAN2Q504Q3 1202 aaKnown RBP21.03■□□□□ 0.96
CCDC43-204ENST00000588687 HERC4Q5GLZ8 1057 aaPredicted RBP21.03■□□□□ 0.96
CCDC43-204ENST00000588687 SMRP1Q8NCR6 262 aa21.03■□□□□ 0.96
CCDC43-204ENST00000588687 TMEM40Q8WWA1 233 aa21.03■□□□□ 0.96
CCDC43-204ENST00000588687 CRYGNQ8WXF5 182 aa21.03■□□□□ 0.96
CCDC43-204ENST00000588687 SDF4Q9BRK5 362 aa21.03■□□□□ 0.96
CCDC43-204ENST00000588687 ERVK-5Q9HDB9 667 aa21.03■□□□□ 0.96
CCDC43-204ENST00000588687 CD207Q9UJ71 328 aa21.03■□□□□ 0.96
CCDC43-204ENST00000588687 PCDHGC5Q9Y5F6 944 aa21.03■□□□□ 0.96
CCDC43-204ENST00000588687 EVPLQ92817 2033 aa21.02■□□□□ 0.96
CCDC43-204ENST00000588687 SLC26A2P50443 739 aa21.02■□□□□ 0.96
CCDC43-204ENST00000588687 EXOSC10Q01780 885 aaKnown RBP21.02■□□□□ 0.96
CCDC43-204ENST00000588687 TMEM266Q2M3C6 531 aa21.02■□□□□ 0.96
CCDC43-204ENST00000588687 ABHD15Q6UXT9 468 aa21.02■□□□□ 0.96
CCDC43-204ENST00000588687 HFE2Q6ZVN8 426 aa21.02■□□□□ 0.96
CCDC43-204ENST00000588687 CCDC60Q8IWA6 550 aaPredicted RBP21.02■□□□□ 0.96
CCDC43-204ENST00000588687 EFHBQ8N7U6 833 aa21.02■□□□□ 0.96
CCDC43-204ENST00000588687 POP1Q99575 1024 aaKnown RBP21.02■□□□□ 0.96
CCDC43-204ENST00000588687 IGFLR1Q9H665 355 aa21.02■□□□□ 0.96
CCDC43-204ENST00000588687 FAM217BQ9NTX9 383 aaPredicted RBP21.02■□□□□ 0.96
CCDC43-204ENST00000588687 RBM28Q9NW13 759 aaKnown RBP21.02■□□□□ 0.96
CCDC43-204ENST00000588687 TMEM260Q9NX78 707 aa21.02■□□□□ 0.96
CCDC43-204ENST00000588687 MUTYHQ9UIF7 546 aa21.02■□□□□ 0.96
CCDC43-204ENST00000588687 WDR81Q562E7 1941 aa21.02■□□□□ 0.95
CCDC43-204ENST00000588687 IGLV3-22A0A075B6J6 115 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 M0QZ92 97 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 DHX15O43143 795 aaKnown RBP21.01■□□□□ 0.95
CCDC43-204ENST00000588687 FOSP01100 380 aaPredicted RBP21.01■□□□□ 0.95
CCDC43-204ENST00000588687 ADCY7P51828 1080 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 KRT76Q01546 638 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 AP3B2Q13367 1082 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 NIPA1Q7RTP0 329 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 ATP8B4Q8TF62 1192 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 POF1BQ8WVV4 589 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 TCEANC2Q96MN5 208 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 UIMC1Q96RL1 719 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 CDHR5Q9HBB8 845 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 ANO2Q9NQ90 1003 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 BARHL2Q9NY43 387 aa21.01■□□□□ 0.95
CCDC43-204ENST00000588687 COL1A2P08123 1366 aa21■□□□□ 0.95
CCDC43-204ENST00000588687 FAM86B1E9PN63 330 aa21■□□□□ 0.95
CCDC43-204ENST00000588687 hCG_1984214I3L0E3 225 aa21■□□□□ 0.95
CCDC43-204ENST00000588687 FAM86B2P0C5J1 330 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms