RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 IER5Q5VY09 327 aa15.96■□□□□ 0.15
ATG4D-206ENST00000586863 JAKMIP3Q5VZ66 844 aa15.96■□□□□ 0.15
ATG4D-206ENST00000586863 NEK9Q8TD19 979 aa15.96■□□□□ 0.15
ATG4D-206ENST00000586863 ZNF689Q96CS4 500 aaPredicted RBP15.96■□□□□ 0.15
ATG4D-206ENST00000586863 NSUN3Q9H649 340 aaKnown RBP15.96■□□□□ 0.15
ATG4D-206ENST00000586863 PCDHA2Q9Y5H9 948 aa15.96■□□□□ 0.15
ATG4D-206ENST00000586863 IGSF9BQ9UPX0 1349 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 IGKV6D-21A0A0A0MT36 114 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 POTEB3A0JP26 581 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 GRM6O15303 877 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 ZNF76P36508 570 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 BMPR1AP36894 532 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 METAP2P50579 478 aaKnown RBP eCLIP15.95■□□□□ 0.14
ATG4D-206ENST00000586863 APOBRQ0VD83 1088 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 BTG3Q14201 252 aaPredicted RBP15.95■□□□□ 0.14
ATG4D-206ENST00000586863 COL19A1Q14993 1142 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 PFKFB3Q16875 520 aaPredicted RBP15.95■□□□□ 0.14
ATG4D-206ENST00000586863 PTCRAQ6ISU1 281 aaPredicted RBP15.95■□□□□ 0.14
ATG4D-206ENST00000586863 POTEBQ6S5H4 581 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 NIPA1Q7RTP0 329 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 RTN4RL1Q86UN2 441 aaPredicted RBP15.95■□□□□ 0.14
ATG4D-206ENST00000586863 CCDC60Q8IWA6 550 aaPredicted RBP15.95■□□□□ 0.14
ATG4D-206ENST00000586863 FAM178BQ8IXR5 827 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 CRYGNQ8WXF5 182 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 CLP1Q92989 425 aaKnown RBP15.95■□□□□ 0.14
ATG4D-206ENST00000586863 PABPC5Q96DU9 382 aaKnown RBP15.95■□□□□ 0.14
ATG4D-206ENST00000586863 UIMC1Q96RL1 719 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 GLT8D2Q9H1C3 349 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 PADI3Q9ULW8 664 aa15.95■□□□□ 0.14
ATG4D-206ENST00000586863 PIEZO1Q92508 2521 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 IGLV3-22A0A075B6J6 115 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 SMIM35A0A1B0GVV1 85 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 GRXCR2A6NFK2 248 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 M0QZ92 97 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 DHX15O43143 795 aaKnown RBP15.94■□□□□ 0.14
ATG4D-206ENST00000586863 DGKIO75912 1065 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 CSPG5O95196 566 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 RB1P06400 928 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 HMGB1P09429 215 aaKnown RBP15.94■□□□□ 0.14
ATG4D-206ENST00000586863 SCG2P13521 617 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 FGD1P98174 961 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 MTHFD1LQ6UB35 978 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 ABHD15Q6UXT9 468 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 Q6ZUG5 572 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 PLA2G4DQ86XP0 818 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 CRIPAKQ8N1N5 446 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 KCNB2Q92953 911 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 TNPO1Q92973 898 aaKnown RBP15.94■□□□□ 0.14
ATG4D-206ENST00000586863 LRFN3Q9BTN0 628 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 C11orf84Q9BUA3 381 aaPredicted RBP15.94■□□□□ 0.14
ATG4D-206ENST00000586863 FTHL17Q9BXU8 183 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 CELF4Q9BZC1 486 aaKnown RBP15.94■□□□□ 0.14
ATG4D-206ENST00000586863 C11orf16Q9NQ32 467 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 RWDD3Q9Y3V2 267 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 SQORQ9Y6N5 450 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 NID2Q14112 1375 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 FNDC1Q4ZHG4 1894 aaPredicted RBP15.94■□□□□ 0.14
ATG4D-206ENST00000586863 KDM3AQ9Y4C1 1321 aa15.94■□□□□ 0.14
ATG4D-206ENST00000586863 ESYT2A0FGR8 921 aa15.93■□□□□ 0.14
ATG4D-206ENST00000586863 BACH1O14867 736 aa15.93■□□□□ 0.14
ATG4D-206ENST00000586863 SLC26A2P50443 739 aa15.93■□□□□ 0.14
ATG4D-206ENST00000586863 PAK2Q13177 524 aa15.93■□□□□ 0.14
ATG4D-206ENST00000586863 TMEM266Q2M3C6 531 aa15.93■□□□□ 0.14
ATG4D-206ENST00000586863 EP400NLQ6ZTU2 488 aa15.93■□□□□ 0.14
ATG4D-206ENST00000586863 ATP8B4Q8TF62 1192 aa15.93■□□□□ 0.14
ATG4D-206ENST00000586863 BRF1Q92994 677 aa15.93■□□□□ 0.14
ATG4D-206ENST00000586863 JAKMIP1Q96N16 626 aaKnown RBP15.93■□□□□ 0.14
ATG4D-206ENST00000586863 LMAN2LQ9H0V9 348 aa15.93■□□□□ 0.14
ATG4D-206ENST00000586863 TMX1Q9H3N1 280 aa15.93■□□□□ 0.14
ATG4D-206ENST00000586863 CLDND1Q9NY35 253 aa15.93■□□□□ 0.14
ATG4D-206ENST00000586863 MRPL42Q9Y6G3 142 aaKnown RBP15.93■□□□□ 0.14
ATG4D-206ENST00000586863 FAM86C2PA6NEL3 165 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 ZBTB42B2RXF5 422 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 IPO5O00410 1097 aaKnown RBP15.92■□□□□ 0.14
ATG4D-206ENST00000586863 HBP1O60381 514 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 CYP3A4P08684 503 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 ATP4AP20648 1035 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 KLRC1P26715 233 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 GATMP50440 423 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 KRT76Q01546 638 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 PKN1Q16512 942 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 PAN2Q504Q3 1202 aaKnown RBP15.92■□□□□ 0.14
ATG4D-206ENST00000586863 FAM160B1Q5W0V3 765 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 PDXDC2PQ6P474 469 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 NPAS4Q8IUM7 802 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 CMTR2Q8IYT2 770 aaKnown RBP15.92■□□□□ 0.14
ATG4D-206ENST00000586863 GJD3Q8N144 294 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 REXO1Q8N1G1 1221 aaKnown RBP15.92■□□□□ 0.14
ATG4D-206ENST00000586863 ZMYND12Q9H0C1 365 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 ZNF302Q9NR11 478 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 GINS2Q9Y248 185 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 SNX14Q9Y5W7 946 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 PLXNA4Q9HCM2 1894 aa15.92■□□□□ 0.14
ATG4D-206ENST00000586863 COL1A2P08123 1366 aa15.91■□□□□ 0.14
ATG4D-206ENST00000586863 CCDC196A0A1B0GTZ2 297 aa15.91■□□□□ 0.14
ATG4D-206ENST00000586863 PPFIA3O75145 1194 aa15.91■□□□□ 0.14
ATG4D-206ENST00000586863 MMP1P03956 469 aa15.91■□□□□ 0.14
ATG4D-206ENST00000586863 HSPA4P34932 840 aa15.91■□□□□ 0.14
ATG4D-206ENST00000586863 LTBRP36941 435 aa15.91■□□□□ 0.14
ATG4D-206ENST00000586863 HYAL1Q12794 435 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms