RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 RTN1Q16799 776 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 RAB11FIP4Q86YS3 637 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 CYP2W1Q8TAV3 490 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 FAM122AQ96E09 287 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 CELF4Q9BZC1 486 aaKnown RBP17.12■□□□□ 0.33
VAPA-209ENST00000585042 RNF39Q9H2S5 420 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 AGO3Q9H9G7 860 aaKnown RBP17.12■□□□□ 0.33
VAPA-209ENST00000585042 AGO4Q9HCK5 861 aaKnown RBP17.12■□□□□ 0.33
VAPA-209ENST00000585042 RAPGEFL1Q9UHV5 662 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 TRPC6Q9Y210 931 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 HCN4Q9Y3Q4 1203 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 TRPV2Q9Y5S1 764 aa17.12■□□□□ 0.33
VAPA-209ENST00000585042 CCDC196A0A1B0GTZ2 297 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 POTEB3A0JP26 581 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 STXBP3O00186 592 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 HBP1O60381 514 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 ARP10275 920 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 ALADP13716 330 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 CD52P31358 61 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 CTC1Q2NKJ3 1217 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 ODR4Q5SWX8 454 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 TYW1BQ6NUM6 668 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 POTEBQ6S5H4 581 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 RTN4RL1Q86UN2 441 aaPredicted RBP17.11■□□□□ 0.33
VAPA-209ENST00000585042 NPAS4Q8IUM7 802 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 CMTR2Q8IYT2 770 aaKnown RBP17.11■□□□□ 0.33
VAPA-209ENST00000585042 KHSRPQ92945 711 aaKnown RBP eCLIP17.11■□□□□ 0.331e-8■■■■□ 19.6
VAPA-209ENST00000585042 ANO3Q9BYT9 981 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 BRPF3Q9ULD4 1205 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 IGSF9BQ9UPX0 1349 aa17.11■□□□□ 0.33
VAPA-209ENST00000585042 CYP3A4P08684 503 aa17.1■□□□□ 0.33
VAPA-209ENST00000585042 IL9P15248 144 aa17.1■□□□□ 0.33
VAPA-209ENST00000585042 ITGB3BPQ13352 177 aaPredicted RBP17.1■□□□□ 0.33
VAPA-209ENST00000585042 FAM160B1Q5W0V3 765 aa17.1■□□□□ 0.33
VAPA-209ENST00000585042 MTHFD1LQ6UB35 978 aa17.1■□□□□ 0.33
VAPA-209ENST00000585042 ABHD15Q6UXT9 468 aa17.1■□□□□ 0.33
VAPA-209ENST00000585042 FAM49AQ9H0Q0 323 aaPredicted RBP17.1■□□□□ 0.33
VAPA-209ENST00000585042 PADI3Q9ULW8 664 aa17.1■□□□□ 0.33
VAPA-209ENST00000585042 H3BQ06 376 aaPredicted RBP17.09■□□□□ 0.33
VAPA-209ENST00000585042 RBAK-RBAKDNI3L0D1 243 aa17.09■□□□□ 0.33
VAPA-209ENST00000585042 GRM6O15303 877 aa17.09■□□□□ 0.33
VAPA-209ENST00000585042 MMP1P03956 469 aa17.09■□□□□ 0.33
VAPA-209ENST00000585042 CENPBP07199 599 aaPredicted RBP17.09■□□□□ 0.33
VAPA-209ENST00000585042 SSTR3P32745 418 aaPredicted RBP17.09■□□□□ 0.33
VAPA-209ENST00000585042 ZNF76P36508 570 aa17.09■□□□□ 0.33
VAPA-209ENST00000585042 KRT76Q01546 638 aa17.09■□□□□ 0.33
VAPA-209ENST00000585042 CENPQQ7L2Z9 268 aaPredicted RBP17.09■□□□□ 0.33
VAPA-209ENST00000585042 PPP2R3CQ969Q6 453 aa17.09■□□□□ 0.33
VAPA-209ENST00000585042 C11orf16Q9NQ32 467 aa17.09■□□□□ 0.33
VAPA-209ENST00000585042 FAM217BQ9NTX9 383 aaPredicted RBP17.09■□□□□ 0.33
VAPA-209ENST00000585042 CLDND1Q9NY35 253 aa17.09■□□□□ 0.33
VAPA-209ENST00000585042 PLAGL2Q9UPG8 496 aa17.09■□□□□ 0.33
VAPA-209ENST00000585042 COL1A2P08123 1366 aa17.09■□□□□ 0.33
VAPA-209ENST00000585042 ESYT2A0FGR8 921 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 C19orf67A6NJJ6 358 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 GOLGA8AA7E2F4 631 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 GOLGA8BA8MQT2 603 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 PRR33A8MZF0 331 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 KLRC1P26715 233 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 LTBRP36941 435 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 PAK2Q13177 524 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 PFKFB3Q16875 520 aaPredicted RBP17.08■□□□□ 0.32
VAPA-209ENST00000585042 ZNF484Q5JVG2 852 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 ATP8B4Q8TF62 1192 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 CRYGNQ8WXF5 182 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 LINC01599Q8WXQ3 324 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 UPF3BQ9BZI7 483 aaKnown RBP17.08■□□□□ 0.32
VAPA-209ENST00000585042 TBC1D22BQ9NU19 505 aa17.08■□□□□ 0.32
VAPA-209ENST00000585042 KLF18A0A0U1RQI7 1052 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 NEFLP07196 543 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 SCG2P13521 617 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 HYAL1Q12794 435 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 ADCK5Q3MIX3 580 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 MIS18BP1Q6P0N0 1132 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 PLA2G4DQ86XP0 818 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 ADHFE1Q8IWW8 467 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 RASEFQ8IZ41 740 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 ZNF710Q8N1W2 664 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 FBXL16Q8N461 479 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 CCDC12Q8WUD4 166 aaPredicted RBP17.07■□□□□ 0.32
VAPA-209ENST00000585042 ZMYND12Q9H0C1 365 aa17.07■□□□□ 0.32
VAPA-209ENST00000585042 IPO5O00410 1097 aaKnown RBP17.06■□□□□ 0.32
VAPA-209ENST00000585042 BACH1O14867 736 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 DHX15O43143 795 aaKnown RBP17.06■□□□□ 0.32
VAPA-209ENST00000585042 CCNE2O96020 404 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 CDC27P30260 824 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 SARSP49591 514 aaKnown RBP17.06■□□□□ 0.32
VAPA-209ENST00000585042 ADAM15Q13444 863 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 SMAD2Q15796 467 aaKnown RBP17.06■□□□□ 0.32
VAPA-209ENST00000585042 ZNF746Q6NUN9 644 aaPredicted RBP17.06■□□□□ 0.32
VAPA-209ENST00000585042 PDXDC2PQ6P474 469 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 EP400NLQ6ZTU2 488 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 KIAA0319LQ8IZA0 1049 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 SPPL3Q8TCT6 385 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 TRAPPC12Q8WVT3 735 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 KCNB2Q92953 911 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 ZBTB10Q96DT7 871 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 PGBD1Q96JS3 809 aa17.06■□□□□ 0.32
VAPA-209ENST00000585042 POP1Q99575 1024 aaKnown RBP17.06■□□□□ 0.32
VAPA-209ENST00000585042 C6orf50Q9HD87 102 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms