RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 TXKP42681 527 aa13.39□□□□□ -0.27
GGA3-217ENST00000583667 ANO6Q4KMQ2 910 aa13.39□□□□□ -0.27
GGA3-217ENST00000583667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
GGA3-217ENST00000583667 GSDMAQ96QA5 445 aa13.39□□□□□ -0.27
GGA3-217ENST00000583667 MMTAG2Q9BU76 263 aaKnown RBP13.39□□□□□ -0.27
GGA3-217ENST00000583667 TEX13BQ9BXU2 312 aa13.39□□□□□ -0.27
GGA3-217ENST00000583667 TTC12Q9H892 705 aaPredicted RBP13.39□□□□□ -0.27
GGA3-217ENST00000583667 KBTBD4Q9NVX7 518 aa13.39□□□□□ -0.27
GGA3-217ENST00000583667 LRWD1Q9UFC0 647 aa13.39□□□□□ -0.27
GGA3-217ENST00000583667 CTDP1Q9Y5B0 961 aaPredicted RBP13.39□□□□□ -0.27
GGA3-217ENST00000583667 PCDHA5Q9Y5H7 936 aa13.39□□□□□ -0.27
GGA3-217ENST00000583667 ZNF236Q9UL36 1845 aa13.39□□□□□ -0.27
GGA3-217ENST00000583667 ZNF318Q5VUA4 2279 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 FAM86B1E9PN63 330 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 FAM86B2P0C5J1 330 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 ZNF865P0CJ78 1059 aaPredicted RBP13.38□□□□□ -0.27
GGA3-217ENST00000583667 ATP2A2P16615 1042 aaKnown RBP13.38□□□□□ -0.27
GGA3-217ENST00000583667 TECP42680 631 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 ZNF165P49910 485 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 DPYDQ12882 1025 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 TMEM132BQ14DG7 1078 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 IQCB1Q15051 598 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 NAALADL2Q58DX5 795 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 RRAGBQ5VZM2 374 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 CABP7Q86V35 215 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 FAM126BQ8IXS8 530 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 PDILTQ8N807 584 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 SHCBP1Q8NEM2 672 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 CHST13Q8NET6 341 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 PRSS33Q8NF86 280 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.38□□□□□ -0.27
GGA3-217ENST00000583667 SYTL5Q8TDW5 730 aaPredicted RBP13.38□□□□□ -0.27
GGA3-217ENST00000583667 ARNTL2Q8WYA1 636 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 DHX58Q96C10 678 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 TRERF1Q96PN7 1200 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 PPP1R9BQ96SB3 815 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 PANK2Q9BZ23 570 aa13.38□□□□□ -0.27
GGA3-217ENST00000583667 ZFHX2Q9C0A1 2572 aaPredicted RBP13.38□□□□□ -0.27
GGA3-217ENST00000583667 MYH7BA7E2Y1 1941 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 C5orf42Q9H799 3197 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.37□□□□□ -0.27
GGA3-217ENST00000583667 ARVCFO00192 962 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 NFIBO00712 420 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 LPXNO60711 386 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 CD4P01730 458 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 ALAS1P13196 640 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 AKR1A1P14550 325 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 STAT3P40763 770 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 SPIRE1Q08AE8 756 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 GRB10Q13322 594 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 PNOCQ13519 176 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 MORC3Q14149 939 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 ZRSR1Q15695 479 aaKnown RBP13.37□□□□□ -0.27
GGA3-217ENST00000583667 LEXMQ3ZCV2 418 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 CEP55Q53EZ4 464 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 PCNX4Q63HM2 1172 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 CNNM4Q6P4Q7 775 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 FCHSD1Q86WN1 690 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 ABRAQ8N0Z2 381 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 MLKLQ8NB16 471 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 SMARCE1Q969G3 411 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 CALML4Q96GE6 196 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 MFSD14AQ96MC6 490 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 GLT1D1Q96MS3 346 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 GTPBP4Q9BZE4 634 aaKnown RBP13.37□□□□□ -0.27
GGA3-217ENST00000583667 SPATC1LQ9H0A9 340 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 CBX8Q9HC52 389 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 STK17AQ9UEE5 414 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 UMODL1Q5DID0 1318 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 SYNRGQ9UMZ2 1314 aa13.37□□□□□ -0.27
GGA3-217ENST00000583667 A0A0G2JMZ2 1700 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 MYADML2A6NDP7 307 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 MSH4O15457 936 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 GFRA3O60609 400 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 ARHGEF15O94989 841 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 IL9P15248 144 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 COPB2P35606 906 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 STAT6P42226 847 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 IRX5P78411 483 aaPredicted RBP13.36□□□□□ -0.27
GGA3-217ENST00000583667 SETQ01105 290 aaPredicted RBP13.36□□□□□ -0.27
GGA3-217ENST00000583667 TAP1Q03518 808 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 KARSQ15046 597 aaKnown RBP13.36□□□□□ -0.27
GGA3-217ENST00000583667 MUM1L1Q5H9M0 696 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 KRT79Q5XKE5 535 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
GGA3-217ENST00000583667 RNF207Q6ZRF8 634 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 RIOX2Q8IUF8 465 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 ANP32BQ92688 251 aaKnown RBP13.36□□□□□ -0.27
GGA3-217ENST00000583667 SLC5A5Q92911 643 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 VTI1AQ96AJ9 217 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 VWCEQ96DN2 955 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 PDLIM2Q96JY6 352 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 RIT2Q99578 217 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 MTRQ99707 1265 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 MXRA8Q9BRK3 442 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 TINF2Q9BSI4 451 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 DNAJC25Q9H1X3 360 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 MROH8Q9H579 483 aa13.36□□□□□ -0.27
GGA3-217ENST00000583667 RNF146Q9NTX7 359 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms